RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 OR52E2Q8NGJ4 325 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 DYNC2LI1Q8TCX1 351 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 TAAR8Q969N4 342 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 TAAR9Q96RI9 348 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 ZPBPQ9BS86 351 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 TNFRSF10DQ9UBN6 386 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 HIF3AQ9Y2N7 669 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 B4DXG7 233 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 J3QRE1 110 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 FBXO45P0C2W1 286 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 TMED10P49755 219 aaKnown RBP24.09■■□□□ 1.45
LDB1-202ENST00000425280 POLR2HP52434 150 aaKnown RBP24.09■■□□□ 1.45
LDB1-202ENST00000425280 SPEM2Q0P670 501 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 LHFPL3Q86UP9 236 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 OR51G2Q8NGK0 314 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 RASL10BQ96S79 203 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 GPX7Q96SL4 187 aaPredicted RBP24.09■■□□□ 1.45
LDB1-202ENST00000425280 OR51V1Q9H2C8 321 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 NRIP3Q9NQ35 241 aa24.09■■□□□ 1.45
LDB1-202ENST00000425280 WDFY3Q8IZQ1 3526 aa24.08■■□□□ 1.45
LDB1-202ENST00000425280 LOC100506127A0A0U1RQW1 187 aa24.08■■□□□ 1.45
LDB1-202ENST00000425280 CLPXO76031 633 aa24.08■■□□□ 1.45
LDB1-202ENST00000425280 CLUP10909 449 aa24.08■■□□□ 1.45
LDB1-202ENST00000425280 ATP6V1E1P36543 226 aa24.08■■□□□ 1.45
LDB1-202ENST00000425280 AQP2P41181 271 aa24.08■■□□□ 1.45
LDB1-202ENST00000425280 BICRALQ6AI39 1079 aa24.08■■□□□ 1.45
LDB1-202ENST00000425280 ZBTB46Q86UZ6 589 aa24.08■■□□□ 1.45
LDB1-202ENST00000425280 OR4K13Q8NH42 304 aa24.08■■□□□ 1.45
LDB1-202ENST00000425280 ZHX1-C8orf76Q96EF9 292 aa24.08■■□□□ 1.45
LDB1-202ENST00000425280 LIN37Q96GY3 246 aaPredicted RBP24.08■■□□□ 1.45
LDB1-202ENST00000425280 TEAD3Q99594 435 aa24.08■■□□□ 1.45
LDB1-202ENST00000425280 CDC6Q99741 560 aa24.08■■□□□ 1.45
LDB1-202ENST00000425280 CHCHD6Q9BRQ6 235 aa24.08■■□□□ 1.45
LDB1-202ENST00000425280 ZNF649Q9BS31 505 aa24.08■■□□□ 1.45
LDB1-202ENST00000425280 JAM3Q9BX67 310 aa24.08■■□□□ 1.45
LDB1-202ENST00000425280 KLHL21Q9UJP4 597 aa24.08■■□□□ 1.45
LDB1-202ENST00000425280 FBXL4Q9UKA2 621 aa24.08■■□□□ 1.45
LDB1-202ENST00000425280 PADI1Q9ULC6 663 aa24.08■■□□□ 1.45
LDB1-202ENST00000425280 BLOC1S5-TXNDC5H3BN57 136 aa24.07■■□□□ 1.44
LDB1-202ENST00000425280 DKK1O94907 266 aa24.07■■□□□ 1.44
LDB1-202ENST00000425280 CD79BP40259 229 aa24.07■■□□□ 1.44
LDB1-202ENST00000425280 RPS5P46782 204 aaKnown RBP24.07■■□□□ 1.44
LDB1-202ENST00000425280 EXT1Q16394 746 aa24.07■■□□□ 1.44
LDB1-202ENST00000425280 SOWAHCQ53LP3 525 aaPredicted RBP24.07■■□□□ 1.44
LDB1-202ENST00000425280 ARMC4Q5T2S8 1044 aa24.07■■□□□ 1.44
LDB1-202ENST00000425280 C6orf15Q6UXA7 325 aaPredicted RBP24.07■■□□□ 1.44
LDB1-202ENST00000425280 GRINAQ7Z429 371 aa24.07■■□□□ 1.44
LDB1-202ENST00000425280 FAM98AQ8NCA5 519 aaKnown RBP24.07■■□□□ 1.44
LDB1-202ENST00000425280 PSD4Q8NDX1 1056 aa24.07■■□□□ 1.44
LDB1-202ENST00000425280 TMED7-TICAM2A0A0A6YYA0 188 aa24.07■■□□□ 1.44
LDB1-202ENST00000425280 ANKUB1A6NFN9 424 aa24.07■■□□□ 1.44
LDB1-202ENST00000425280 SLC22A31A6NKX4 558 aa24.07■■□□□ 1.44
LDB1-202ENST00000425280 ARPC3O15145 178 aa24.07■■□□□ 1.44
LDB1-202ENST00000425280 PAICSP22234 425 aaKnown RBP24.07■■□□□ 1.44
LDB1-202ENST00000425280 ERVK-25P63136 954 aa24.07■■□□□ 1.44
LDB1-202ENST00000425280 KHDRBS1Q07666 443 aaKnown RBP eCLIP24.07■■□□□ 1.44
LDB1-202ENST00000425280 TMED1Q13445 227 aa24.07■■□□□ 1.44
LDB1-202ENST00000425280 TIPARPQ7Z3E1 657 aaKnown RBP24.07■■□□□ 1.44
LDB1-202ENST00000425280 ADGRG3Q86Y34 549 aa24.07■■□□□ 1.44
LDB1-202ENST00000425280 LRRC75AQ8NAA5 344 aa24.07■■□□□ 1.44
LDB1-202ENST00000425280 SDR9C7Q8NEX9 313 aa24.07■■□□□ 1.44
LDB1-202ENST00000425280 OR10G3Q8NGC4 313 aa24.07■■□□□ 1.44
LDB1-202ENST00000425280 GATAD2BQ8WXI9 593 aa24.07■■□□□ 1.44
LDB1-202ENST00000425280 SECISBP2Q96T21 854 aaKnown RBP24.07■■□□□ 1.44
LDB1-202ENST00000425280 KATNB1Q9BVA0 655 aa24.07■■□□□ 1.44
LDB1-202ENST00000425280 DDA1Q9BW61 102 aa24.07■■□□□ 1.44
LDB1-202ENST00000425280 ERVK13-1Q9NX77 482 aa24.07■■□□□ 1.44
LDB1-202ENST00000425280 TMED7Q9Y3B3 224 aa24.07■■□□□ 1.44
LDB1-202ENST00000425280 PLD2O14939 933 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 SUSD5O60279 629 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 DLGAP3O95886 979 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 BGLAPP02818 100 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 JMJD7P0C870 316 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 UQCRC1P31930 480 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 RPS7P62081 194 aaKnown RBP24.06■■□□□ 1.44
LDB1-202ENST00000425280 C1QL3Q5VWW1 255 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 ZNF485Q8NCK3 441 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 OR11G2Q8NGC1 345 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 CENPOQ9BU64 300 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 DCSTAMPQ9H295 470 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 RNF167Q9H6Y7 350 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 FKRPQ9H9S5 495 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 KLHL1Q9NR64 748 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 KLRF1Q9NZS2 232 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 ZNF229Q9UJW7 825 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 TRAV36DV7A0A075B6V5 113 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 TMEM72A0PK05 275 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 C4orf47A7E2U8 309 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 UGT2B10P36537 528 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 NTRK2Q16620 822 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 SLC15A4Q8N697 577 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 M1APQ8TC57 530 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 TM9SF4Q92544 642 aa24.06■■□□□ 1.44
LDB1-202ENST00000425280 SPACA9Q96E40 222 aaPredicted RBP24.06■■□□□ 1.44
LDB1-202ENST00000425280 A0A1W2PNU3 283 aaPredicted RBP24.05■■□□□ 1.44
LDB1-202ENST00000425280 SLC25A12O75746 678 aa24.05■■□□□ 1.44
LDB1-202ENST00000425280 GYPBP06028 91 aa24.05■■□□□ 1.44
LDB1-202ENST00000425280 PTGDSP41222 190 aa24.05■■□□□ 1.44
LDB1-202ENST00000425280 SLC16A1P53985 500 aa24.05■■□□□ 1.44
LDB1-202ENST00000425280 SUMO3P55854 103 aaPredicted RBP24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms