RNA–Protein interactions for RNA: ENST00000424417.2

SOX9-AS1-203, SOX9 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene SOX9-AS1, Length 576 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-203ENST00000424417 TMEM45BQ96B21 275 aa7.4□□□□□ -1.22
SOX9-AS1-203ENST00000424417 TMEM186Q96B77 213 aa7.4□□□□□ -1.22
SOX9-AS1-203ENST00000424417 MTERF3Q96E29 417 aa7.4□□□□□ -1.22
SOX9-AS1-203ENST00000424417 AURKBQ96GD4 344 aaPredicted RBP7.4□□□□□ -1.22
SOX9-AS1-203ENST00000424417 FMO2Q99518 471 aa7.4□□□□□ -1.22
SOX9-AS1-203ENST00000424417 DOK1Q99704 481 aa7.4□□□□□ -1.22
SOX9-AS1-203ENST00000424417 ZNF350Q9GZX5 532 aa7.4□□□□□ -1.22
SOX9-AS1-203ENST00000424417 SAP130Q9H0E3 1048 aa7.4□□□□□ -1.22
SOX9-AS1-203ENST00000424417 NELFAQ9H3P2 528 aa7.4□□□□□ -1.22
SOX9-AS1-203ENST00000424417 PARPBPQ9NWS1 579 aa7.4□□□□□ -1.22
SOX9-AS1-203ENST00000424417 TMEM181Q9P2C4 612 aa7.4□□□□□ -1.22
SOX9-AS1-203ENST00000424417 ATP6V1HQ9UI12 483 aa7.4□□□□□ -1.22
SOX9-AS1-203ENST00000424417 PCDHB10Q9UN67 800 aa7.4□□□□□ -1.22
SOX9-AS1-203ENST00000424417 SPEF1Q9Y4P9 236 aa7.4□□□□□ -1.22
SOX9-AS1-203ENST00000424417 PCDHB14Q9Y5E9 798 aa7.4□□□□□ -1.22
SOX9-AS1-203ENST00000424417 PCDHGB1Q9Y5G3 927 aa7.4□□□□□ -1.22
SOX9-AS1-203ENST00000424417 LOC105371242A0A075B767 164 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 TMED7-TICAM2A0A0A6YYA0 188 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 TMEM129A0AVI4 362 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 ZC3H12DA2A288 527 aaKnown RBP7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 TMEM233B4DJY2 109 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 H3BQF6 201 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 TRIM77I1YAP6 450 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 AP3D1O14617 1153 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 AZIN1O14977 448 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 ANKRD28O15084 1053 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 CFLARO15519 480 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 STX11O75558 287 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 PROCP04070 461 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 MSMBP08118 114 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 MATN1P21941 496 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 IDH2P48735 452 aaKnown RBP7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 ARFIP2P53365 341 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 UBE2NP61088 152 aaKnown RBP7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 HBA1P69905 142 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 SLC35A1P78382 337 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 OTUD3Q5T2D3 398 aaPredicted RBP7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 KANK2Q63ZY3 851 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 C1orf229Q6ZS94 237 aaPredicted RBP7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 LINGO2Q7L985 606 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 AAED1Q7RTV5 226 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 ZNF572Q7Z3I7 529 aaPredicted RBP7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 GPAT4Q86UL3 456 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 DDIASQ8IXT1 998 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 POMGNT2Q8NAT1 580 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 NUP37Q8NFH4 326 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 MZB1Q8WU39 189 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 CKAP2Q8WWK9 683 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 CCDC126Q96EE4 140 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 SLC35G5Q96KT7 338 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 LRRC37BQ96QE4 947 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 SLC6A7Q99884 636 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 NAA11Q9BSU3 229 aaPredicted RBP7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 C1orf50Q9BV19 199 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 RBM4Q9BWF3 364 aaKnown RBP7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 OBP2BQ9NPH6 170 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 ESM1Q9NQ30 184 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 TMEM45AQ9NWC5 275 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 CRNNQ9UBG3 495 aaPredicted RBP7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 TBK1Q9UHD2 729 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 USP22Q9UPT9 525 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 TRAPPC4Q9Y296 219 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 TMED5Q9Y3A6 229 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 TMED7Q9Y3B3 224 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 GRIP1Q9Y3R0 1128 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 ARHGAP32A7KAX9 2087 aa7.39□□□□□ -1.23
SOX9-AS1-203ENST00000424417 ARPC4-TTLL3A0A0A6YYG9 625 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 IGHV2OR16-5A0A0B4J2B6 119 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 RNF103-CHMP3A0A140T963 221 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 A0A1W2PPM1 405 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 ZNF503-AS2A6NEH8 195 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 OR6C65A6NJZ3 312 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 ZNF587BE7ETH6 402 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 PIP5K1BO14986 540 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 EIF1BO60739 113 aaKnown RBP7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 UPK3AO75631 287 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 KRT33AO76009 404 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 URI1O94763 535 aaPredicted RBP7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 AKR7A3O95154 331 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 AVPP01185 164 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 IGLV1-44P01699 117 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 GAAP10253 952 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 SAGP10523 405 aaPredicted RBP7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 NPR2P20594 1047 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 CASQ1P31415 396 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 GPR6P46095 362 aaPredicted RBP7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 CLK1P49759 484 aaKnown RBP7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 SELENOPP49908 381 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 DNAJB13P59910 316 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 FUT5Q11128 374 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 NPRL3Q12980 569 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 SCGB2A2Q13296 93 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 OR7A5Q15622 319 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 MSMPQ1L6U9 139 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 ARHGAP11BQ3KRB8 267 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 LSM12Q3MHD2 195 aaKnown RBP7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 FAM153CQ494X1 144 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 ELFN2Q5R3F8 820 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 C1QTNF12Q5T7M4 302 aa7.38□□□□□ -1.23
SOX9-AS1-203ENST00000424417 TYW3Q6IPR3 259 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms