RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 MBLAC1A4D2B0 266 aaPredicted RBP10.46□□□□□ -0.74
PTCH1-205ENST00000418258 RETP07949 1114 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 RPS2P15880 293 aaKnown RBP10.46□□□□□ -0.74
PTCH1-205ENST00000418258 MAGEA6P43360 314 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 CST9LP1Q5W188 147 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 COX15Q7KZN9 410 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 HAS2Q92819 552 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 CMSS1Q9BQ75 279 aaKnown RBP10.46□□□□□ -0.74
PTCH1-205ENST00000418258 CDCP1Q9H5V8 836 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 TEX10Q9NXF1 929 aaPredicted RBP10.46□□□□□ -0.74
PTCH1-205ENST00000418258 GABARAPH6UMI1 98 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 GPR39O43194 453 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 NXPH2O95156 264 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 GABARAPO95166 117 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 CNIH1O95406 144 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 AIFM1O95831 613 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 WNT7BP56706 349 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 RAB38P57729 211 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 TBC1D28Q2M2D7 210 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 C1orf220Q5T0J3 134 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 AADACL3Q5VUY0 350 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 CNIH2Q6PI25 160 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 TSSK4Q6SA08 328 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 IFI44Q8TCB0 444 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 ZFAND1Q8TCF1 268 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 THOC3Q96J01 351 aaKnown RBP10.46□□□□□ -0.74
PTCH1-205ENST00000418258 EGLN3Q9H6Z9 239 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 MYOTQ9UBF9 498 aa10.46□□□□□ -0.74
PTCH1-205ENST00000418258 ARPC5O15511 151 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 ABHD16AO95870 558 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 FCGR2AP12318 317 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 PPP5CP53041 499 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 PRDX1Q06830 199 aaKnown RBP10.45□□□□□ -0.74
PTCH1-205ENST00000418258 MEF2DQ14814 521 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 METTL11BQ5VVY1 283 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 MISPQ8IVT2 679 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 MIB2Q96AX9 1013 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 NKX3-1Q99801 234 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-205ENST00000418258 PBX4Q9BYU1 374 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 SLC22A7Q9Y694 548 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 V9GY05 133 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 N4BP2Q86UW6 1770 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-205ENST00000418258 HLA-DMAP28067 261 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 ARL16Q0P5N6 197 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 TDHQ8IZJ6 230 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 B3GNT7Q8NFL0 401 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 OCSTAMPQ9BR26 566 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 FBXO7Q9Y3I1 522 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 PENKP01210 267 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-205ENST00000418258 PTPN6P29350 595 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 CLDN10P78369 228 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 SLC14A1Q13336 389 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 PAGE3Q5JUK9 113 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 ACBD4Q8NC06 268 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 ZNF286AQ9HBT8 521 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 NME4O00746 187 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 ADAM12O43184 909 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 HSD17B1P14061 328 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 KIR2DL3P43628 341 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 EDDM3BP56851 147 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 HABP2Q14520 560 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-205ENST00000418258 GOLM1Q8NBJ4 401 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 OR4A16Q8NH70 328 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 GAB3Q8WWW8 586 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 HHIPL1Q96JK4 782 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 UBL7Q96S82 380 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-205ENST00000418258 INSM2Q96T92 566 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-205ENST00000418258 GSTO2Q9H4Y5 243 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 INTS6Q9UL03 887 aaKnown RBP10.45□□□□□ -0.74
PTCH1-205ENST00000418258 PLEKHM1Q9Y4G2 1056 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 SVILO95425 2214 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 GMDSO60547 372 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 SSX2Q16385 188 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 CTSL3PQ5NE16 218 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 NTMT1Q9BV86 223 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 PPIL3Q9H2H8 161 aaKnown RBP10.45□□□□□ -0.74
PTCH1-205ENST00000418258 DPM1O60762 260 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 IL3RAP26951 378 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 DPP4P27487 766 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 GTDC1Q4AE62 458 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 GARNL3Q5VVW2 1013 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 CPZQ66K79 652 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 NPSR1Q6W5P4 371 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 RBMXL1Q96E39 390 aaKnown RBP10.45□□□□□ -0.74
PTCH1-205ENST00000418258 SLC25A31Q9H0C2 315 aa10.45□□□□□ -0.74
PTCH1-205ENST00000418258 F8W036 122 aa10.44□□□□□ -0.74
PTCH1-205ENST00000418258 G3V2L1 256 aa10.44□□□□□ -0.74
PTCH1-205ENST00000418258 ZNF593O00488 134 aaPredicted RBP10.44□□□□□ -0.74
PTCH1-205ENST00000418258 UTS2O95399 124 aa10.44□□□□□ -0.74
PTCH1-205ENST00000418258 PRDX3P30048 256 aaKnown RBP10.44□□□□□ -0.74
PTCH1-205ENST00000418258 RAB5BP61020 215 aa10.44□□□□□ -0.74
PTCH1-205ENST00000418258 BLOC1S1P78537 153 aa10.44□□□□□ -0.74
PTCH1-205ENST00000418258 BOD1Q96IK1 185 aa10.44□□□□□ -0.74
PTCH1-205ENST00000418258 PRSS16Q9NQE7 514 aa10.44□□□□□ -0.74
PTCH1-205ENST00000418258 GRPP07492 148 aa10.44□□□□□ -0.74
PTCH1-205ENST00000418258 ANXA7P20073 488 aaKnown RBP10.44□□□□□ -0.74
PTCH1-205ENST00000418258 RAB6AP20340 208 aa10.44□□□□□ -0.74
PTCH1-205ENST00000418258 F2RP25116 425 aa10.44□□□□□ -0.74
PTCH1-205ENST00000418258 NPBWR1P48145 328 aa10.44□□□□□ -0.74
PTCH1-205ENST00000418258 PODNL1Q6PEZ8 512 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms