RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 SLC19A2O60779 497 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 WDR1O75083 606 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 PMS2P2O95744 297 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 FPR1P21462 350 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 ENPP1P22413 925 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 DIO1P49895 249 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 TDGF1P3P51864 188 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 DLX5P56178 289 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 PER3P56645 1201 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 CLDN20P56880 219 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 ELF3P78545 371 aaPredicted RBP7.61□□□□□ -1.19
TRIM48-201ENST00000417545 C19orf57Q0VDD7 668 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 PPP1R8Q12972 351 aaKnown RBP7.61□□□□□ -1.19
TRIM48-201ENST00000417545 DGCR6Q14129 220 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 ATP6AP1Q15904 470 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 FAM69AQ5T7M9 428 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 ZNF324BQ6AW86 544 aaPredicted RBP7.61□□□□□ -1.19
TRIM48-201ENST00000417545 MBOAT2Q6ZWT7 520 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 AMIGO2Q86SJ2 522 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 ZNF605Q86T29 641 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 NRMQ8IXM6 262 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 RNF113BQ8IZP6 322 aaKnown RBP7.61□□□□□ -1.19
TRIM48-201ENST00000417545 ATG16L2Q8NAA4 619 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 PAPD5Q8NDF8 572 aaKnown RBP7.61□□□□□ -1.19
TRIM48-201ENST00000417545 OR10G2Q8NGC3 310 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 OR4K5Q8NGD3 323 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 PFN4Q8NHR9 129 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 GIPC3Q8TF64 312 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 OSTF1Q92882 214 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 SLCO4A1Q96BD0 722 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 BPIFA2Q96DR5 249 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 DUS3LQ96G46 650 aaKnown RBP7.61□□□□□ -1.19
TRIM48-201ENST00000417545 WDYHV1Q96HA8 205 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 BBC3Q96PG8 261 aaPredicted RBP7.61□□□□□ -1.19
TRIM48-201ENST00000417545 SEMA6AQ9H2E6 1030 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 PNPLA3Q9NST1 481 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 PDP1Q9P0J1 537 aaPredicted RBP7.61□□□□□ -1.19
TRIM48-201ENST00000417545 OSGIN2Q9Y236 505 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 ORC6Q9Y5N6 252 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 LYVE1Q9Y5Y7 322 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 KIAA1549Q9HCM3 1950 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 MPDZO75970 2070 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 LAMA5O15230 3695 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 TRBV4-1A0A0J9YWV2 114 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 SH3PXD2BA1X283 911 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 ZC3H12DA2A288 527 aaKnown RBP7.61□□□□□ -1.19
TRIM48-201ENST00000417545 HTR3EA5X5Y0 456 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 SLC22A20A6NK97 555 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 SAC3D1A6NKF1 404 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 AHRRA9YTQ3 701 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 G3V2T6 193 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 FFAR1O14842 300 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 GPR37O15354 613 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 ZNHIT1O43257 154 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 DNPH1O43598 174 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 EIF1BO60739 113 aaKnown RBP7.61□□□□□ -1.19
TRIM48-201ENST00000417545 OR7A10O76100 309 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 CH25HO95992 272 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 MT-ATP6P00846 226 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 CPN1P15169 458 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 SHC1P29353 583 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 PTGER4P35408 488 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 GPR4P46093 362 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 CLDN18P56856 261 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 PMS2P3Q13401 168 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 C1DQ13901 141 aaKnown RBP7.61□□□□□ -1.19
TRIM48-201ENST00000417545 PON3Q15166 354 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 GXYLT1Q4G148 440 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 OTUD3Q5T2D3 398 aaPredicted RBP7.61□□□□□ -1.19
TRIM48-201ENST00000417545 C1orf185Q5T7R7 199 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 GTF2IRD2BQ6EKJ0 949 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 TMEM225Q6GV28 225 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 THSD4Q6ZMP0 1018 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 WDR88Q6ZMY6 472 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 TMPPEQ6ZT21 453 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 GPAT4Q86UL3 456 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 GTF2IRD2Q86UP8 949 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 TSPYL5Q86VY4 417 aaPredicted RBP7.61□□□□□ -1.19
TRIM48-201ENST00000417545 HIPK1Q86Z02 1210 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 ZDHHC13Q8IUH4 622 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 SVOPLQ8N434 492 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 OR5K1Q8NHB7 308 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 MFSD8Q8NHS3 518 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 SLC7A13Q8TCU3 470 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 GNPDA2Q8TDQ7 276 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 MIB2Q96AX9 1013 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 ZNF524Q96C55 264 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 KTI12Q96EK9 354 aaPredicted RBP7.61□□□□□ -1.19
TRIM48-201ENST00000417545 CENPNQ96H22 339 aaPredicted RBP7.61□□□□□ -1.19
TRIM48-201ENST00000417545 FAM46AQ96IP4 442 aaKnown RBP7.61□□□□□ -1.19
TRIM48-201ENST00000417545 ARL5BQ96KC2 179 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 TUBA1CQ9BQE3 449 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 PRSS27Q9BQR3 290 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 PRDM14Q9GZV8 571 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 DCLRE1BQ9H816 532 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 FKRPQ9H9S5 495 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 MAN2C1Q9NTJ4 1040 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 TRAPPC4Q9Y296 219 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 CORINQ9Y5Q5 1042 aa7.61□□□□□ -1.19
TRIM48-201ENST00000417545 CACNA1GO43497 2377 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms