RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 TNFRSF13BO14836 293 aaPredicted RBP2.44□□□□□ -2.02
APP-207ENST00000415997 CXCL13O43927 109 aa2.44□□□□□ -2.02
APP-207ENST00000415997 NIPSNAP2O75323 286 aa2.44□□□□□ -2.02
APP-207ENST00000415997 RAD51DO75771 328 aa2.44□□□□□ -2.02
APP-207ENST00000415997 GOT2P00505 430 aaKnown RBP2.44□□□□□ -2.02
APP-207ENST00000415997 IGHMP01871 453 aa2.44□□□□□ -2.02
APP-207ENST00000415997 IFNW1P05000 195 aa2.44□□□□□ -2.02
APP-207ENST00000415997 ITGA5P08648 1049 aa2.44□□□□□ -2.02
APP-207ENST00000415997 ADRA2AP08913 450 aa2.44□□□□□ -2.02
APP-207ENST00000415997 KITP10721 976 aa2.44□□□□□ -2.02
APP-207ENST00000415997 COX7A2P14406 83 aa2.44□□□□□ -2.02
APP-207ENST00000415997 FERP16591 822 aa2.44□□□□□ -2.02
APP-207ENST00000415997 GPX3P22352 226 aa2.44□□□□□ -2.02
APP-207ENST00000415997 MSNP26038 577 aaKnown RBP2.44□□□□□ -2.02
APP-207ENST00000415997 CD80P33681 288 aa2.44□□□□□ -2.02
APP-207ENST00000415997 HNF4AP41235 474 aa2.44□□□□□ -2.02
APP-207ENST00000415997 SLC1A3P43003 542 aa2.44□□□□□ -2.02
APP-207ENST00000415997 MAGEA1P43355 309 aa2.44□□□□□ -2.02
APP-207ENST00000415997 EVX1P49640 407 aa2.44□□□□□ -2.02
APP-207ENST00000415997 BPIFB3P59826 476 aa2.44□□□□□ -2.02
APP-207ENST00000415997 HERVK_113P63132 956 aa2.44□□□□□ -2.02
APP-207ENST00000415997 ERVK-8P63133 956 aa2.44□□□□□ -2.02
APP-207ENST00000415997 SLC35A2P78381 396 aa2.44□□□□□ -2.02
APP-207ENST00000415997 REEP5Q00765 189 aa2.44□□□□□ -2.02
APP-207ENST00000415997 ACVR1Q04771 509 aa2.44□□□□□ -2.02
APP-207ENST00000415997 TSTA3Q13630 321 aaPredicted RBP2.44□□□□□ -2.02
APP-207ENST00000415997 PDK2Q15119 407 aa2.44□□□□□ -2.02
APP-207ENST00000415997 SGCBQ16585 318 aa2.44□□□□□ -2.02
APP-207ENST00000415997 GRAMD1BQ3KR37 738 aa2.44□□□□□ -2.02
APP-207ENST00000415997 C6orf163Q5TEZ5 329 aa2.44□□□□□ -2.02
APP-207ENST00000415997 RAET1LQ5VY80 246 aa2.44□□□□□ -2.02
APP-207ENST00000415997 OR5M10Q6IEU7 315 aa2.44□□□□□ -2.02
APP-207ENST00000415997 CASC4Q6P4E1 433 aa2.44□□□□□ -2.02
APP-207ENST00000415997 NPNTQ6UXI9 565 aa2.44□□□□□ -2.02
APP-207ENST00000415997 BRD3OSQ6XYD6 125 aa2.44□□□□□ -2.02
APP-207ENST00000415997 LRRC70Q7Z2Q7 622 aa2.44□□□□□ -2.02
APP-207ENST00000415997 C17orf64Q86WR6 236 aa2.44□□□□□ -2.02
APP-207ENST00000415997 VSIG1Q86XK7 387 aa2.44□□□□□ -2.02
APP-207ENST00000415997 PRR22Q8IZ63 422 aa2.44□□□□□ -2.02
APP-207ENST00000415997 ST13P4Q8IZP2 240 aaPredicted RBP2.44□□□□□ -2.02
APP-207ENST00000415997 ZNF567Q8N184 647 aa2.44□□□□□ -2.02
APP-207ENST00000415997 LYG1Q8N1E2 194 aa2.44□□□□□ -2.02
APP-207ENST00000415997 C17orf78Q8N4C9 275 aa2.44□□□□□ -2.02
APP-207ENST00000415997 TRPV3Q8NET8 790 aa2.44□□□□□ -2.02
APP-207ENST00000415997 TRIM58Q8NG06 486 aa2.44□□□□□ -2.02
APP-207ENST00000415997 OR52E2Q8NGJ4 325 aa2.44□□□□□ -2.02
APP-207ENST00000415997 OR10S1Q8NGN2 331 aa2.44□□□□□ -2.02
APP-207ENST00000415997 OR5M1Q8NGP8 315 aa2.44□□□□□ -2.02
APP-207ENST00000415997 STYXQ8WUJ0 223 aa2.44□□□□□ -2.02
APP-207ENST00000415997 CKAP2Q8WWK9 683 aa2.44□□□□□ -2.02
APP-207ENST00000415997 NELFBQ8WX92 580 aa2.44□□□□□ -2.02
APP-207ENST00000415997 C1GALT1C1Q96EU7 318 aa2.44□□□□□ -2.02
APP-207ENST00000415997 ZNF830Q96NB3 372 aaPredicted RBP2.44□□□□□ -2.02
APP-207ENST00000415997 BIRC8Q96P09 236 aa2.44□□□□□ -2.02
APP-207ENST00000415997 RNF157Q96PX1 679 aa2.44□□□□□ -2.02
APP-207ENST00000415997 OR4K3Q96R72 315 aa2.44□□□□□ -2.02
APP-207ENST00000415997 APOL2Q9BQE5 337 aa2.44□□□□□ -2.02
APP-207ENST00000415997 PSD2Q9BQI7 771 aa2.44□□□□□ -2.02
APP-207ENST00000415997 KATNB1Q9BVA0 655 aa2.44□□□□□ -2.02
APP-207ENST00000415997 SF3B5Q9BWJ5 86 aaKnown RBP2.44□□□□□ -2.02
APP-207ENST00000415997 C1QTNF6Q9BXI9 259 aa2.44□□□□□ -2.02
APP-207ENST00000415997 ERVK-6Q9BXR3 956 aa2.44□□□□□ -2.02
APP-207ENST00000415997 PRRG4Q9BZD6 226 aa2.44□□□□□ -2.02
APP-207ENST00000415997 NXF5Q9H1B4 397 aaKnown RBP2.44□□□□□ -2.02
APP-207ENST00000415997 TPK1Q9H3S4 243 aa2.44□□□□□ -2.02
APP-207ENST00000415997 TMEM165Q9HC07 324 aa2.44□□□□□ -2.02
APP-207ENST00000415997 LYRM4Q9HD34 91 aa2.44□□□□□ -2.02
APP-207ENST00000415997 CCDC177Q9NQR7 707 aaPredicted RBP2.44□□□□□ -2.02
APP-207ENST00000415997 INPP5EQ9NRR6 644 aa2.44□□□□□ -2.02
APP-207ENST00000415997 LYARQ9NX58 379 aaKnown RBP2.44□□□□□ -2.02
APP-207ENST00000415997 KLRF1Q9NZS2 232 aa2.44□□□□□ -2.02
APP-207ENST00000415997 MALT1Q9UDY8 824 aa2.44□□□□□ -2.02
APP-207ENST00000415997 HOOK1Q9UJC3 728 aaKnown RBP2.44□□□□□ -2.02
APP-207ENST00000415997 ERVK-19Q9WJR5 959 aa2.44□□□□□ -2.02
APP-207ENST00000415997 HEATR1Q9H583 2144 aaKnown RBP2.44□□□□□ -2.02
APP-207ENST00000415997 IGLV3-32A0A0A0MS00 114 aa2.43□□□□□ -2.02
APP-207ENST00000415997 TRAV40A0A0B4J280 105 aa2.43□□□□□ -2.02
APP-207ENST00000415997 A0A0J9YW62 118 aa2.43□□□□□ -2.02
APP-207ENST00000415997 A0A1W2PPL8 197 aa2.43□□□□□ -2.02
APP-207ENST00000415997 BICDL2A1A5D9 508 aa2.43□□□□□ -2.02
APP-207ENST00000415997 OR6C70A6NIJ9 312 aa2.43□□□□□ -2.02
APP-207ENST00000415997 PRMT5O14744 637 aaPredicted RBP2.43□□□□□ -2.02
APP-207ENST00000415997 TO15178 435 aa2.43□□□□□ -2.02
APP-207ENST00000415997 ACOX3O15254 700 aa2.43□□□□□ -2.02
APP-207ENST00000415997 FOXH1O75593 365 aa2.43□□□□□ -2.02
APP-207ENST00000415997 ANXA9O76027 345 aa2.43□□□□□ -2.02
APP-207ENST00000415997 SCELO95171 688 aa2.43□□□□□ -2.02
APP-207ENST00000415997 IGLV1-44P01699 117 aa2.43□□□□□ -2.02
APP-207ENST00000415997 IGHV4-59P01825 116 aa2.43□□□□□ -2.02
APP-207ENST00000415997 CATP04040 527 aaKnown RBP2.43□□□□□ -2.02
APP-207ENST00000415997 PABPC4LP0CB38 370 aaKnown RBP2.43□□□□□ -2.02
APP-207ENST00000415997 RHCEP18577 417 aa2.43□□□□□ -2.02
APP-207ENST00000415997 NPR2P20594 1047 aa2.43□□□□□ -2.02
APP-207ENST00000415997 S1PR1P21453 382 aa2.43□□□□□ -2.02
APP-207ENST00000415997 TCEA1P23193 301 aaKnown RBP2.43□□□□□ -2.02
APP-207ENST00000415997 RPS3P23396 243 aaKnown RBP eCLIP2.43□□□□□ -2.022e-8■□□□□ 9
APP-207ENST00000415997 CALCRP30988 508 aa2.43□□□□□ -2.02
APP-207ENST00000415997 PPP1R2P41236 205 aa2.43□□□□□ -2.02
APP-207ENST00000415997 MAGEA8P43361 318 aa2.43□□□□□ -2.02
APP-207ENST00000415997 TNNT3P45378 269 aaPredicted RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms