RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 MYDGFQ969H8 173 aa12.74□□□□□ -0.37
GPNMB-203ENST00000409458 MUL1Q969V5 352 aa12.74□□□□□ -0.37
GPNMB-203ENST00000409458 KIAA1143Q96AT1 154 aaPredicted RBP12.74□□□□□ -0.37
GPNMB-203ENST00000409458 NTNG2Q96CW9 530 aa12.74□□□□□ -0.37
GPNMB-203ENST00000409458 ANGPTL4Q9BY76 406 aa12.74□□□□□ -0.37
GPNMB-203ENST00000409458 VCX3AQ9NNX9 186 aa12.74□□□□□ -0.37
GPNMB-203ENST00000409458 HINT3Q9NQE9 182 aaKnown RBP12.74□□□□□ -0.37
GPNMB-203ENST00000409458 NANSQ9NR45 359 aa12.74□□□□□ -0.37
GPNMB-203ENST00000409458 CNOT2Q9NZN8 540 aaKnown RBP12.74□□□□□ -0.37
GPNMB-203ENST00000409458 PCDHGB6Q9Y5F9 930 aa12.74□□□□□ -0.37
GPNMB-203ENST00000409458 PCDHGB1Q9Y5G3 927 aa12.74□□□□□ -0.37
GPNMB-203ENST00000409458 DOCK10Q96BY6 2186 aa12.74□□□□□ -0.37
GPNMB-203ENST00000409458 TRAV36DV7A0A075B6V5 113 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 EFCAB10A6NFE3 127 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 A8MVM7 634 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 G3V3Y1 287 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 ASAH2BP0C7U1 165 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 LIPCP11150 499 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 PIPP12273 146 aaPredicted RBP12.73□□□□□ -0.37
GPNMB-203ENST00000409458 ST3GAL4Q11206 333 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 SRSF6Q13247 344 aaKnown RBP12.73□□□□□ -0.37
GPNMB-203ENST00000409458 AADACL4Q5VUY2 407 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 GTF2IRD2BQ6EKJ0 949 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 CCDC81Q6ZN84 652 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 MDGA2Q7Z553 956 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 GTF2IRD2Q86UP8 949 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 VASH2Q86V25 355 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 STX19Q8N4C7 294 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 ANKK1Q8NFD2 765 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 BBS1Q8NFJ9 593 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 OR4K17Q8NGC6 315 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 POC1BQ8TC44 478 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 RELTQ969Z4 430 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 C1GALT1C1Q96EU7 318 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 OR11A1Q9GZK7 315 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 CMC2Q9NRP2 79 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 RYDENQ9NUL5 291 aaKnown RBP12.73□□□□□ -0.37
GPNMB-203ENST00000409458 WDR70Q9NW82 654 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 ZNF229Q9UJW7 825 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 HIF3AQ9Y2N7 669 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 RPL36Q9Y3U8 105 aaKnown RBP12.73□□□□□ -0.37
GPNMB-203ENST00000409458 CEPT1Q9Y6K0 416 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 RIF1Q5UIP0 2472 aaKnown RBP12.73□□□□□ -0.37
GPNMB-203ENST00000409458 FAM183AA6NL82 134 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 PRODHO43272 600 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 DXOO77932 396 aaKnown RBP12.73□□□□□ -0.37
GPNMB-203ENST00000409458 IL11P20809 199 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 TCEA1P23193 301 aaKnown RBP12.73□□□□□ -0.37
GPNMB-203ENST00000409458 AQP2P41181 271 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 SLC25A53Q5H9E4 307 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 C1orf140Q5VVS0 124 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 SLC22A10Q63ZE4 541 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 JMJD6Q6NYC1 403 aaPredicted RBP12.73□□□□□ -0.37
GPNMB-203ENST00000409458 SVOPQ8N4V2 548 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 STK35Q8TDR2 534 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 IP6K3Q96PC2 410 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 TAPBPLQ9BX59 468 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 LHPPQ9H008 270 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 FKRPQ9H9S5 495 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 ACOT13Q9NPJ3 140 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 TAS2R16Q9NYV7 291 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 NDUFA13Q9P0J0 144 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 CHRNA9Q9UGM1 479 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 BAIAP2Q9UQB8 552 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 GVINP1Q7Z2Y8 2422 aa12.73□□□□□ -0.37
GPNMB-203ENST00000409458 A0A0G2JMM0 328 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 A0A1W2PPB8 328 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 A0A1W2PRS3 328 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 KIR3DP1A8MWS1 328 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 H3BSA7 217 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 SNPHO15079 494 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 INMTO95050 263 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 ITGA3P26006 1051 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 UQCRC1P31930 480 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 RPL4P36578 427 aaKnown RBP12.72□□□□□ -0.37
GPNMB-203ENST00000409458 APOBEC1P41238 236 aaKnown RBP12.72□□□□□ -0.37
GPNMB-203ENST00000409458 PRPS1P60891 318 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 CAMK2BQ13554 666 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 ZNF362Q5T0B9 420 aaPredicted RBP12.72□□□□□ -0.37
GPNMB-203ENST00000409458 ARHGAP11AQ6P4F7 1023 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 BORAQ6PGQ7 559 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 CXXC5Q7LFL8 322 aaKnown RBP12.72□□□□□ -0.37
GPNMB-203ENST00000409458 NANOGNBQ7Z5D8 188 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 ZNF227Q86WZ6 799 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 PLCZ1Q86YW0 608 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 LRRC75AQ8NAA5 344 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 OR13F1Q8NGS4 319 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 MRGPRX4Q96LA9 322 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 SGCZQ96LD1 299 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 ERMAPQ96PL5 475 aaPredicted RBP12.72□□□□□ -0.37
GPNMB-203ENST00000409458 GPX7Q96SL4 187 aaPredicted RBP12.72□□□□□ -0.37
GPNMB-203ENST00000409458 TUBA1CQ9BQE3 449 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 SEC14L4Q9UDX3 406 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 CDV3Q9UKY7 258 aaKnown RBP12.72□□□□□ -0.37
GPNMB-203ENST00000409458 ADAM18Q9Y3Q7 739 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 IER3IP1Q9Y5U9 82 aa12.72□□□□□ -0.37
GPNMB-203ENST00000409458 BLOC1S5-TXNDC5H3BN57 136 aa12.71□□□□□ -0.37
GPNMB-203ENST00000409458 SEC14L2O76054 403 aa12.71□□□□□ -0.37
GPNMB-203ENST00000409458 F10P00742 488 aa12.71□□□□□ -0.37
GPNMB-203ENST00000409458 TSPAN19P0C672 248 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms