RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 DPY19L4Q7Z388 723 aa7.69□□□□□ -1.18
SNX13-201ENST00000409076 BATF2Q8N1L9 274 aa7.69□□□□□ -1.18
SNX13-201ENST00000409076 SRFBP1Q8NEF9 429 aaKnown RBP7.69□□□□□ -1.18
SNX13-201ENST00000409076 OR51D1Q8NGF3 324 aa7.69□□□□□ -1.18
SNX13-201ENST00000409076 SETD7Q8WTS6 366 aaKnown RBP7.69□□□□□ -1.18
SNX13-201ENST00000409076 PMM1Q92871 262 aa7.69□□□□□ -1.18
SNX13-201ENST00000409076 NXPE2Q96DL1 559 aa7.69□□□□□ -1.18
SNX13-201ENST00000409076 SLC17A9Q9BYT1 436 aa7.69□□□□□ -1.18
SNX13-201ENST00000409076 PARP12Q9H0J9 701 aaKnown RBP7.69□□□□□ -1.18
SNX13-201ENST00000409076 LRIT1Q9P2V4 623 aa7.69□□□□□ -1.18
SNX13-201ENST00000409076 DIDO1Q9BTC0 2240 aaKnown RBP7.68□□□□□ -1.18
SNX13-201ENST00000409076 FREM3P0C091 2139 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 LEUTXA8MZ59 168 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 EEF1E1-BLOC1S5C9J1V9 151 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 ZNF593O00488 134 aaPredicted RBP7.68□□□□□ -1.18
SNX13-201ENST00000409076 RGS13O14921 159 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 CTSVO60911 334 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 PCBP4P57723 403 aaKnown RBP7.68□□□□□ -1.18
SNX13-201ENST00000409076 REEP5Q00765 189 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 ENPP2Q13822 863 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 GRM7Q14831 915 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 UBXN2BQ14CS0 331 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 ZNHIT3Q15649 155 aaPredicted RBP7.68□□□□□ -1.18
SNX13-201ENST00000409076 SLC48A1Q6P1K1 146 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 LRRN1Q6UXK5 716 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 GDPGP1Q6ZNW5 385 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 IKBIPQ70UQ0 350 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 SDR16C5Q8N3Y7 309 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 MRPL43Q8N983 215 aaKnown RBP7.68□□□□□ -1.18
SNX13-201ENST00000409076 PTP4A1Q93096 173 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 ZNF707Q96C28 371 aaPredicted RBP7.68□□□□□ -1.18
SNX13-201ENST00000409076 MMABQ96EY8 250 aaPredicted RBP7.68□□□□□ -1.18
SNX13-201ENST00000409076 SFXN2Q96NB2 322 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 SLC6A7Q99884 636 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 SLC7A5P2Q9GIP4 190 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 ATG5Q9H1Y0 275 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 NOX3Q9HBY0 568 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 KLHL9Q9P2J3 617 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 CGGBP1Q9UFW8 167 aaPredicted RBP7.68□□□□□ -1.18
SNX13-201ENST00000409076 FBXO4Q9UKT5 387 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 ERVK-19Q9WJR5 959 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 CACNA1DQ01668 2161 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 DNAJC13O75165 2243 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 FITM1A5D6W6 292 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 NPIPB8E9PQR5 432 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 CTNSO60931 367 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 RCBTB2O95199 551 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 ZGLP1P0C6A0 271 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 F8A1P23610 371 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 MNDAP41218 407 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 LIMS1P48059 325 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 HMGA2P52926 109 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 CEBPGP53567 150 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 PRSS12P56730 875 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 CTXN1P60606 82 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 ERVK-21P61565 698 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 RPS15P62841 145 aaKnown RBP7.68□□□□□ -1.18
SNX13-201ENST00000409076 HTR4Q13639 388 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 TPBGQ13641 420 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 FAM53BQ14153 422 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 ARHGAP40Q5TG30 622 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 C1orf189Q5VU69 101 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 LAMTOR1Q6IAA8 161 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 TMEM88Q6PEY1 159 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 FIGLAQ6QHK4 219 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 SLC35F2Q8IXU6 374 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 AVL9Q8NBF6 648 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 ZNRF4Q8WWF5 429 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 POP5Q969H6 163 aaKnown RBP7.68□□□□□ -1.18
SNX13-201ENST00000409076 SDF2Q99470 211 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 TPSD1Q9BZJ3 242 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 C20orf85Q9H1P6 137 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 TMEM231Q9H6L2 316 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 CA10Q9NS85 328 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 PRR13Q9NZ81 148 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 A0A1W2PPV9 198 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 UBE2QL1A1L167 161 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 H0YGG7 62 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 HCRTR1O43613 425 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 APBB3O95704 486 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 EGFP01133 1207 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 SBK2P0C263 348 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 GLI4P10075 376 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 HTR1FP30939 366 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 TM4SF4P48230 202 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 ARF3P61204 181 aaPredicted RBP7.68□□□□□ -1.18
SNX13-201ENST00000409076 SPOCK1Q08629 439 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 HBMQ6B0K9 141 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 OR7E24Q6IFN5 339 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 MRM1Q6IN84 353 aaKnown RBP7.68□□□□□ -1.18
SNX13-201ENST00000409076 LRFN4Q6PJG9 635 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 DGAT2L6Q6ZPD8 337 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 MDGA2Q7Z553 956 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 LIX1LQ8IVB5 337 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 GOT1L1Q8NHS2 421 aaPredicted RBP7.68□□□□□ -1.18
SNX13-201ENST00000409076 DIO2Q92813 273 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 CMKLR1Q99788 373 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.68□□□□□ -1.18
SNX13-201ENST00000409076 PPP1R3EQ9H7J1 279 aa7.68□□□□□ -1.18
SNX13-201ENST00000409076 PRDM7Q9NQW5 492 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms