RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 RHOJQ9H4E5 214 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 UFSP2Q9NUQ7 469 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 IMPAD1Q9NX62 359 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 RCOR3Q9P2K3 495 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 PCSK1NQ9UHG2 260 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 CLEC4AQ9UMR7 237 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 UBIAD1Q9Y5Z9 338 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 ALG6Q9Y672 507 aa3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 BZW2Q9Y6E2 419 aaKnown RBP3.82□□□□□ -1.8
HMGB3P18-201ENST00000406327 ASTN1O14525 1302 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 A0A087X0T9 212 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 A0A0J9YWU9 116 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 ARHGEF35A5YM69 484 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 ZSCAN5CA6NGD5 496 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 BTNL10A8MVZ5 291 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 EPM2AB3EWF7 344 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 OR7A17O14581 309 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 PRRG1O14668 218 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 CHMP2AO43633 222 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 ERLIN1O75477 346 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 LYPLA2O95372 231 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 SEMA4FO95754 770 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 RHOXF2BP0C7M4 288 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 FAM228BP0C875 321 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 UCHL3P15374 230 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 XRCC1P18887 633 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 ANXA13P27216 316 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 PBLDP30039 288 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 NMT1P30419 496 aaKnown RBP3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 GRIA1P42261 906 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 EPS15P42566 896 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 POU3F4P49335 361 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 ERVK11-1P61568 191 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 RPL23AP62750 156 aaKnown RBP3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 EWSR1Q01844 656 aaKnown RBP eCLIP3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 TNFRSF17Q02223 184 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 PAX8Q06710 450 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 CKAP4Q07065 602 aaKnown RBP3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 DMTNQ08495 405 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 PUDPQ08623 228 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 CRMP1Q14194 572 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 EXOC3L4Q17RC7 722 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 C10orf120Q5SQS8 335 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 STXBP4Q6ZWJ1 553 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 CCDC80Q76M96 950 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 TAS2R42Q7RTR8 314 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 LRRC75A-AS1Q8N1F1 130 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 ABHD12Q8N2K0 398 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 MMGT1Q8N4V1 131 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 RPRD1AQ96P16 312 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 ALS2CR12Q96Q35 445 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 TAAR1Q96RJ0 339 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 RHOXF2Q9BQY4 288 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 TMEM121Q9BTD3 319 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 TMEM43Q9BTV4 400 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 CCDC28BQ9BUN5 200 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 PARVGQ9HBI0 331 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 SLC38A10Q9HBR0 1119 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 DMAC2Q9NW81 257 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 WRAP73Q9P2S5 460 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 SNX12Q9UMY4 172 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 OARD1Q9Y530 152 aa3.81□□□□□ -1.8
HMGB3P18-201ENST00000406327 FRMPD4Q14CM0 1322 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 BRWD3Q6RI45 1802 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 TRAV26-1A0A087WT03 109 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 A0A0U1RQS6 177 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 METTL21EPA6NDL7 271 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 RPL37AP8A6NKH3 93 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 AP3B1O00203 1094 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 LRRTM2O43300 516 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 B4GALT2O60909 372 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 SH3BGRLO75368 114 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 UGT2B17O75795 530 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 FLOT1O75955 427 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 B3GAT3O94766 335 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 IL1BP01584 269 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 TCP1P17987 556 aaKnown RBP3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 ACVR1BP36896 505 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 HPCAL1P37235 193 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 QARSP47897 775 aaKnown RBP3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 CASP4P49662 377 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 ARHGDIBP52566 201 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 VSNL1P62760 191 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 COX10Q12887 443 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 ITGB3BPQ13352 177 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 IL18R1Q13478 541 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 PEX6Q13608 980 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 ABRAXAS2Q15018 415 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 PPP1R3AQ16821 1122 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 METTL11BQ5VVY1 283 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 ZNF571Q7Z3V5 609 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 NANOGNBQ7Z5D8 188 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 C12orf56Q8IXR9 622 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 DAW1Q8N136 415 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 SLC22A18ASQ8N1D0 253 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 SUMF1Q8NBK3 374 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 SPATA4Q8NEY3 305 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 OR4Q3Q8NH05 313 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 CNIH3Q8TBE1 160 aa3.8□□□□□ -1.8
HMGB3P18-201ENST00000406327 ZBED6CLQ96FA7 236 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms