RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 TMEM150AQ86TG1 271 aa13.18□□□□□ -0.3
PCDHGA11-201ENST00000398587 BEST3Q8N1M1 668 aa13.18□□□□□ -0.3
PCDHGA11-201ENST00000398587 OR52I1Q8NGK6 324 aa13.18□□□□□ -0.3
PCDHGA11-201ENST00000398587 SLC35A4Q96G79 324 aa13.18□□□□□ -0.3
PCDHGA11-201ENST00000398587 CHRDQ9H2X0 955 aa13.18□□□□□ -0.3
PCDHGA11-201ENST00000398587 TXNL4BQ9NX01 149 aaKnown RBP13.18□□□□□ -0.3
PCDHGA11-201ENST00000398587 HIF3AQ9Y2N7 669 aa13.18□□□□□ -0.3
PCDHGA11-201ENST00000398587 CORINQ9Y5Q5 1042 aa13.18□□□□□ -0.3
PCDHGA11-201ENST00000398587 CACNA1CQ13936 2221 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 ZNF850A8MQ14 1090 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 NOTOA8MTQ0 251 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 SOCS6O14544 535 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 VNN2O95498 520 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 CPNE6O95741 557 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 OR8G3PP0DMU2 310 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 SRFP11831 508 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 ICAM2P13598 275 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 RAB3AP20336 220 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 SLC2A5P22732 501 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 UBE2NP61088 152 aaKnown RBP13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 GPR50Q13585 617 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 ATAD3CQ5T2N8 411 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 HACD4Q5VWC8 232 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 NKAIN2Q5VXU1 208 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 OR52N1Q8NH53 320 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 MRGPRX3Q96LB0 322 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 MBOAT4Q96T53 435 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 DUSP21Q9H596 190 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 UBE2ZQ9H832 354 aaPredicted RBP13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 SEMA4GQ9NTN9 838 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 NUBP2Q9Y5Y2 271 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 A0A1B0GX78 115 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 PRAF2O60831 178 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 RAB3DO95716 219 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 LIPAP38571 399 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 RPS25P62851 125 aaKnown RBP13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 ELAVL1Q15717 326 aaKnown RBP13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 NKAIN4Q8IVV8 208 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 SPAG16Q8N0X2 631 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 OR5D14Q8NGL3 314 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 EID2BQ96D98 161 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 SLC25A44Q96H78 314 aaPredicted RBP13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 MMP28Q9H239 520 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 PLCXD1Q9NUJ7 323 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 A3GALT2U3KPV4 340 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 TMEM72A0PK05 275 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 SIGLEC6O43699 453 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 FGF17O60258 216 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 DIRAS3O95661 229 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 SFTPBP07988 381 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 CISD3P0C7P0 127 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 BMP4P12644 408 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 ST6GAL1P15907 406 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 MRPL19P49406 292 aaKnown RBP13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 TEKQ02763 1124 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 FGL1Q08830 312 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 FAM69AQ5T7M9 428 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 METTL11BQ5VVY1 283 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 NCCRP1Q6ZVX7 275 aaPredicted RBP13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 ZSCAN1Q8NBB4 408 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 NLGN4YQ8NFZ3 816 aaPredicted RBP13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 NANOS1Q8WY41 292 aaKnown RBP13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 FOXRED1Q96CU9 486 aaPredicted RBP13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 GABARAPL3Q9BY60 117 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 ARL6Q9H0F7 186 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 PISDQ9UG56 409 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 SLC6A14Q9UN76 642 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 KDM4EB2RXH2 506 aaPredicted RBP13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 F5H0A9 414 aaPredicted RBP13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 H7C417 338 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 OPN1LWP04000 364 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 CSF1P09603 554 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 RAB40ALP0C0E4 278 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 METAP1P53582 386 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 TCTN3Q6NUS6 607 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 LINC00299Q6ZSB3 139 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 CAMKMTQ7Z624 323 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 SERPINA12Q8IW75 414 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 SIMC1Q8NDZ2 872 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 SYNPRQ8TBG9 265 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 BRIX1Q8TDN6 353 aaKnown RBP13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 RAB40AQ8WXH6 277 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 GHSRQ92847 366 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 ZNF419Q96HQ0 510 aaPredicted RBP13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 SLC41A2Q96JW4 573 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 NMNAT3Q96T66 252 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 SIAEQ9HAT2 523 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 POLHQ9Y253 713 aa13.17□□□□□ -0.3
PCDHGA11-201ENST00000398587 TMED7-TICAM2A0A0A6YYA0 188 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 CSO75390 466 aaKnown RBP13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 NSA2O95478 260 aaKnown RBP13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 CD160O95971 181 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 OR1D5P58170 312 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 PSPHP78330 225 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 SMAD4Q13485 552 aaKnown RBP13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 RNF165Q6ZSG1 346 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 STX12Q86Y82 276 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 FAM26EQ8N5C1 309 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 OR7G2Q8NG99 324 aa13.16□□□□□ -0.3
PCDHGA11-201ENST00000398587 OR5H2Q8NGV7 314 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms