RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 MCCC2Q9HCC0 563 aa17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 TBC1D23Q9NUY8 699 aa17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 TUBA8Q9NY65 449 aaPredicted RBP17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 PLA2G3Q9NZ20 509 aa17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 MYRFQ9Y2G1 1151 aa17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 FRYQ5TBA9 3013 aa17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 URB1O60287 2271 aaKnown RBP17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 CACNA1BQ00975 2339 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 ZIC3O60481 467 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 MPZL2O60487 215 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 F10P00742 488 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 MT-ATP6P00846 226 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 DPP4P27487 766 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 ELK4P28324 431 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 CXCR4P61073 352 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 SNRPGP62308 76 aaKnown RBP17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 DEFB109BQ30KR1 87 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 KCTD21Q4G0X4 260 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 C1orf140Q5VVS0 124 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 IQCF1Q8N6M8 205 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 LRRC17Q8N6Y2 441 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 OR4Q3Q8NH05 313 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 APH1BQ8WW43 257 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 ZNF566Q969W8 418 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 SAMD8Q96LT4 415 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 TNFRSF13CQ96RJ3 184 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 TSSK6Q9BXA6 273 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 POLDIP3Q9BY77 421 aaKnown RBP17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 POTEKPQ9BYX7 375 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 ENKD1Q9H0I2 346 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 IMPAD1Q9NX62 359 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 ZNF229Q9UJW7 825 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 HIF3AQ9Y2N7 669 aa17.61■□□□□ 0.41
PDLIM2-205ENST00000397761 ASPMQ8IZT6 3477 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 TRAV27A0A087WT01 109 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 LRRN3E7EW58 273 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 BHLHE40O14503 412 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 NME2P1O60361 137 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 ZNF17P17021 662 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 CCNA2P20248 432 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 NME2P22392 152 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 FKBP2P26885 142 aaKnown RBP17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 SRD5A2P31213 254 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 RBM48Q5RL73 367 aaKnown RBP17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 SLC25A30Q5SVS4 291 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 FAM69AQ5T7M9 428 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 C1QL3Q5VWW1 255 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 POMZP3Q6PJE2 187 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 THSD4Q6ZMP0 1018 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 ZNF786Q8N393 782 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 LNX2Q8N448 690 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 FDCSPQ8NFU4 85 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 OR2T33Q8NG76 320 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 OR2M7Q8NG81 312 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 OR52L1Q8NGH7 329 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 OR8J1Q8NGP2 316 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 OR51A7Q8NH64 312 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 CNIH3Q8TBE1 160 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 ZFP64Q9NPA5 681 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 NANSQ9NR45 359 aa17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 BOKQ9UMX3 212 aaPredicted RBP17.6■□□□□ 0.41
PDLIM2-205ENST00000397761 CELSR3Q9NYQ7 3312 aa17.59■□□□□ 0.41
PDLIM2-205ENST00000397761 PINLYPA6NC86 204 aa17.59■□□□□ 0.41
PDLIM2-205ENST00000397761 FTCDNL1E5RQL4 147 aa17.59■□□□□ 0.41
PDLIM2-205ENST00000397761 OR2T1O43869 369 aa17.59■□□□□ 0.41
PDLIM2-205ENST00000397761 SP1P08047 785 aa17.59■□□□□ 0.41
PDLIM2-205ENST00000397761 CCDC159P0C7I6 412 aa17.59■□□□□ 0.41
PDLIM2-205ENST00000397761 BMP7P18075 431 aa17.59■□□□□ 0.41
PDLIM2-205ENST00000397761 IL11P20809 199 aa17.59■□□□□ 0.41
PDLIM2-205ENST00000397761 UQCRC1P31930 480 aa17.59■□□□□ 0.41
PDLIM2-205ENST00000397761 CCL11P51671 97 aa17.59■□□□□ 0.41
PDLIM2-205ENST00000397761 PGGHGQ32M88 737 aa17.59■□□□□ 0.41
PDLIM2-205ENST00000397761 TMEM201Q5SNT2 666 aa17.59■□□□□ 0.41
PDLIM2-205ENST00000397761 CASP12Q6UXS9 341 aa17.59■□□□□ 0.41
PDLIM2-205ENST00000397761 CCDC103Q8IW40 242 aa17.59■□□□□ 0.41
PDLIM2-205ENST00000397761 GPX7Q96SL4 187 aaPredicted RBP17.59■□□□□ 0.41
PDLIM2-205ENST00000397761 OR11A1Q9GZK7 315 aa17.59■□□□□ 0.41
PDLIM2-205ENST00000397761 KLF13Q9Y2Y9 288 aaPredicted RBP17.59■□□□□ 0.41
PDLIM2-205ENST00000397761 SHISA8B8ZZ34 492 aa17.58■□□□□ 0.41
PDLIM2-205ENST00000397761 NDUFB2O95178 105 aa17.58■□□□□ 0.41
PDLIM2-205ENST00000397761 HK1P19367 917 aa17.58■□□□□ 0.41
PDLIM2-205ENST00000397761 CRHBPP24387 322 aa17.58■□□□□ 0.41
PDLIM2-205ENST00000397761 GRK5P34947 590 aa17.58■□□□□ 0.41
PDLIM2-205ENST00000397761 RPS5P46782 204 aaKnown RBP17.58■□□□□ 0.41
PDLIM2-205ENST00000397761 PCYT1AP49585 367 aa17.58■□□□□ 0.41
PDLIM2-205ENST00000397761 CLK1P49759 484 aaKnown RBP17.58■□□□□ 0.41
PDLIM2-205ENST00000397761 PRPS1P60891 318 aa17.58■□□□□ 0.41
PDLIM2-205ENST00000397761 GPR85P60893 370 aa17.58■□□□□ 0.41
PDLIM2-205ENST00000397761 FOXK1P85037 733 aa17.58■□□□□ 0.41
PDLIM2-205ENST00000397761 SELENBP1Q13228 472 aa17.58■□□□□ 0.41
PDLIM2-205ENST00000397761 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.58■□□□□ 0.41
PDLIM2-205ENST00000397761 CLEC12AQ5QGZ9 265 aa17.58■□□□□ 0.41
PDLIM2-205ENST00000397761 SLC25A25Q6KCM7 469 aa17.58■□□□□ 0.41
PDLIM2-205ENST00000397761 C3orf33Q6P1S2 294 aa17.58■□□□□ 0.41
PDLIM2-205ENST00000397761 SLC25A43Q8WUT9 341 aaPredicted RBP17.58■□□□□ 0.41
PDLIM2-205ENST00000397761 DDIT4LQ96D03 193 aa17.58■□□□□ 0.41
PDLIM2-205ENST00000397761 SCMH1Q96GD3 660 aa17.58■□□□□ 0.41
PDLIM2-205ENST00000397761 JSRP1Q96MG2 331 aaPredicted RBP17.58■□□□□ 0.41
PDLIM2-205ENST00000397761 PRRG3Q9BZD7 231 aa17.58■□□□□ 0.41
PDLIM2-205ENST00000397761 OR2B2Q9GZK3 357 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms