RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 TM9SF4Q92544 642 aa15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 GABARAPL3Q9BY60 117 aa15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 MFRPQ9BY79 579 aa15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 TTTY12Q9BZ98 90 aa15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 UCK2Q9BZX2 261 aa15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 OR2B2Q9GZK3 357 aa15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 ZNF703Q9H7S9 590 aaPredicted RBP15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 CHRNA9Q9UGM1 479 aa15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 LRRC42Q9Y546 428 aa15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 PCDHGB7Q9Y5F8 929 aa15.29■□□□□ 0.04
TSPAN4-205ENST00000397406 ZC3H12DA2A288 527 aaKnown RBP15.28■□□□□ 0.04
TSPAN4-205ENST00000397406 HTR3EA5X5Y0 456 aa15.28■□□□□ 0.04
TSPAN4-205ENST00000397406 A8MVM7 634 aa15.28■□□□□ 0.04
TSPAN4-205ENST00000397406 E9PQ18 207 aa15.28■□□□□ 0.04
TSPAN4-205ENST00000397406 CDC42EP2O14613 210 aa15.28■□□□□ 0.04
TSPAN4-205ENST00000397406 ZNF208O43345 1280 aa15.28■□□□□ 0.04
TSPAN4-205ENST00000397406 ZNF17P17021 662 aa15.28■□□□□ 0.04
TSPAN4-205ENST00000397406 CDH2P19022 906 aaPredicted RBP15.28■□□□□ 0.04
TSPAN4-205ENST00000397406 GSTM3P21266 225 aa15.28■□□□□ 0.04
TSPAN4-205ENST00000397406 TCEA1P23193 301 aaKnown RBP15.28■□□□□ 0.04
TSPAN4-205ENST00000397406 GDF1P27539 372 aa15.28■□□□□ 0.04
TSPAN4-205ENST00000397406 POLR2IP36954 125 aaKnown RBP15.28■□□□□ 0.04
TSPAN4-205ENST00000397406 RFC3P40938 356 aa15.28■□□□□ 0.04
TSPAN4-205ENST00000397406 B3GALT5-AS1P59052 145 aa15.28■□□□□ 0.04
TSPAN4-205ENST00000397406 ADARB1P78563 741 aaKnown RBP15.28■□□□□ 0.04
TSPAN4-205ENST00000397406 COX10Q12887 443 aa15.28■□□□□ 0.04
TSPAN4-205ENST00000397406 SLC46A3Q7Z3Q1 461 aa15.28■□□□□ 0.04
TSPAN4-205ENST00000397406 CDK20Q8IZL9 346 aa15.28■□□□□ 0.04
TSPAN4-205ENST00000397406 OR5M1Q8NGP8 315 aa15.28■□□□□ 0.04
TSPAN4-205ENST00000397406 STK35Q8TDR2 534 aa15.28■□□□□ 0.04
TSPAN4-205ENST00000397406 KTI12Q96EK9 354 aaPredicted RBP15.28■□□□□ 0.04
TSPAN4-205ENST00000397406 ADI1Q9BV57 179 aa15.28■□□□□ 0.04
TSPAN4-205ENST00000397406 RPH3AQ9Y2J0 694 aaPredicted RBP15.28■□□□□ 0.04
TSPAN4-205ENST00000397406 OR2M5A3KFT3 312 aa15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 OSMP13725 252 aa15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 FUT1P19526 365 aa15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 ELK4P28324 431 aa15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 MAP2K6P52564 334 aa15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 ALDH6A1Q02252 535 aaKnown RBP15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 NPRL3Q12980 569 aa15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 SELENBP1Q13228 472 aa15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 C6orf52Q5T4I8 152 aa15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 SLC6A19Q695T7 634 aa15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 DHRSXQ8N5I4 330 aa15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 FAM83FQ8NEG4 500 aaPredicted RBP15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 TFAP2CQ92754 450 aa15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 SGTBQ96EQ0 304 aa15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 DTNBP1Q96EV8 351 aa15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 PTDSS2Q9BVG9 487 aa15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 GRIP2Q9C0E4 1043 aa15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 OR11A1Q9GZK7 315 aa15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 RIBC2Q9H4K1 309 aa15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 FAM118AQ9NWS6 357 aa15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 B4GALT7Q9UBV7 327 aa15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 RAB26Q9ULW5 256 aa15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 AP4B1Q9Y6B7 739 aa15.27■□□□□ 0.04
TSPAN4-205ENST00000397406 MED12Q93074 2177 aa15.27■□□□□ 0.03
TSPAN4-205ENST00000397406 KIAA1549Q9HCM3 1950 aa15.27■□□□□ 0.03
TSPAN4-205ENST00000397406 TRAV36DV7A0A075B6V5 113 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 LRRN3E7EW58 273 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 HPNP05981 417 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 EPHA2P29317 976 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 CAPGP40121 348 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 LTBQ06643 244 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 TOMM20Q15388 145 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 ZNF74Q16587 644 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 SLC36A3Q495N2 470 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 C1orf140Q5VVS0 124 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 C1QL3Q5VWW1 255 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 C3orf33Q6P1S2 294 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 C5orf46Q6UWT4 87 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 RASSF6Q6ZTQ3 369 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 YRDCQ86U90 279 aaKnown RBP15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 KIF18BQ86Y91 864 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 TMEM251Q8N6I4 163 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 OR14L1PQ8NHC6 308 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 TAAR8Q969N4 342 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 PIGQQ9BRB3 760 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 SERINC1Q9NRX5 453 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 UNC119BA6NIH7 251 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 FAM166BA8MTA8 275 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 EFCAB9A8MZ26 197 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 H0YAE9 185 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 OR7A10O76100 309 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 SOX14O95416 240 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 CH25HO95992 272 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 BGLAPP02818 100 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 IGFBP1P08833 259 aaPredicted RBP15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 CHMP24386 653 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 MAGEA5P43359 124 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 RPS5P46782 204 aaKnown RBP15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 ESRRGP62508 458 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 PLGLB1Q02325 96 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 FHL1Q13642 323 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 PLEKHN1Q494U1 663 aaPredicted RBP15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 WIPI1Q5MNZ9 446 aaPredicted RBP15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 RAET1LQ5VY80 246 aa15.26■□□□□ 0.03
TSPAN4-205ENST00000397406 ZNF620Q6ZNG0 422 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms