RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 AAED1Q7RTV5 226 aa12.96□□□□□ -0.33
SEC13-206ENST00000397102 ZCCHC24Q8N2G6 241 aaKnown RBP12.96□□□□□ -0.33
SEC13-206ENST00000397102 SVOPLQ8N434 492 aa12.96□□□□□ -0.33
SEC13-206ENST00000397102 OR5AK3PQ8NH89 298 aa12.96□□□□□ -0.33
SEC13-206ENST00000397102 TMEM186Q96B77 213 aa12.96□□□□□ -0.33
SEC13-206ENST00000397102 ZNF317Q96PQ6 595 aaPredicted RBP12.96□□□□□ -0.33
SEC13-206ENST00000397102 JMJD8Q96S16 334 aa12.96□□□□□ -0.33
SEC13-206ENST00000397102 MOV10Q9HCE1 1003 aaKnown RBP12.96□□□□□ -0.33
SEC13-206ENST00000397102 DYNLRB1Q9NP97 96 aa12.96□□□□□ -0.33
SEC13-206ENST00000397102 HIF1ANQ9NWT6 349 aa12.96□□□□□ -0.33
SEC13-206ENST00000397102 FIS1Q9Y3D6 152 aa12.96□□□□□ -0.33
SEC13-206ENST00000397102 TMEM129A0AVI4 362 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 ZNF208O43345 1280 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 GLRA3O75311 464 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 BCAS1O75363 584 aaPredicted RBP12.95□□□□□ -0.34
SEC13-206ENST00000397102 CHEK2O96017 543 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 IGLV1-44P01699 117 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 PROCP04070 461 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 ABHD2P08910 425 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 CCNA2P20248 432 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 NPR2P20594 1047 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 MATN1P21941 496 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 MAPK1P28482 360 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 CASQ1P31415 396 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 THBS4P35443 961 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 HTR3AP46098 478 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 RPS26P62854 115 aaKnown RBP12.95□□□□□ -0.34
SEC13-206ENST00000397102 MAPK14Q16539 360 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 EMBQ6PCB8 327 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 OLIG3Q7RTU3 272 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 SPATA21Q7Z572 469 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 ZIC4Q8N9L1 334 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 MAGEE2Q8TD90 523 aaPredicted RBP12.95□□□□□ -0.34
SEC13-206ENST00000397102 PMM1Q92871 262 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 DDIT4LQ96D03 193 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 AURKBQ96GD4 344 aaPredicted RBP12.95□□□□□ -0.34
SEC13-206ENST00000397102 ANKRD27Q96NW4 1050 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 ZNF385AQ96PM9 386 aaKnown RBP12.95□□□□□ -0.34
SEC13-206ENST00000397102 SF3B5Q9BWJ5 86 aaKnown RBP12.95□□□□□ -0.34
SEC13-206ENST00000397102 SERHL2Q9H4I8 314 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 PIF1Q9H611 641 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 ZNF696Q9H7X3 374 aa12.95□□□□□ -0.34
SEC13-206ENST00000397102 EXOSC3Q9NQT5 275 aaKnown RBP12.95□□□□□ -0.34
SEC13-206ENST00000397102 TMED7-TICAM2A0A0A6YYA0 188 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 CFLARO15519 480 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 KRT33AO76009 404 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 MSMBP08118 114 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 IGFBP1P08833 259 aaPredicted RBP12.94□□□□□ -0.34
SEC13-206ENST00000397102 ECHS1P30084 290 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 SOAT1P35610 550 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 IL1RL1Q01638 556 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 POU3F1Q03052 451 aaPredicted RBP12.94□□□□□ -0.34
SEC13-206ENST00000397102 HGFACQ04756 655 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 AWAT1Q58HT5 328 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 OTUD3Q5T2D3 398 aaPredicted RBP12.94□□□□□ -0.34
SEC13-206ENST00000397102 AP1ARQ63HQ0 302 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 KANK2Q63ZY3 851 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 C16orf62Q7Z3J2 963 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 HOMEZQ8IX15 550 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 FAM169BQ8N8A8 192 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 OR9K2Q8NGE7 335 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 MZB1Q8WU39 189 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 CKAP2Q8WWK9 683 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 BCL2L2Q92843 193 aaPredicted RBP12.94□□□□□ -0.34
SEC13-206ENST00000397102 COQ8BQ96D53 544 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 SEC61A2Q9H9S3 476 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 EXD2Q9NVH0 621 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 OXSMQ9NWU1 459 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 PYCARDQ9ULZ3 195 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 USP22Q9UPT9 525 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 TMED7Q9Y3B3 224 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 DNAJC15Q9Y5T4 150 aa12.94□□□□□ -0.34
SEC13-206ENST00000397102 TMEM72A0PK05 275 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 SH3PXD2BA1X283 911 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 ZNF587BE7ETH6 402 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 LYNX1G3V0Z9 82 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 LYPLA1O75608 230 aaPredicted RBP12.93□□□□□ -0.34
SEC13-206ENST00000397102 LGI1O95970 557 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 IGKV3-15P01624 115 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 TFP02787 698 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 GUSBP08236 651 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 LYNX1P0DP58 116 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 EPHA1P21709 976 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 IDH2P48735 452 aaKnown RBP12.93□□□□□ -0.34
SEC13-206ENST00000397102 MAP2K6P52564 334 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 TUBA1BP68363 451 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 TUBA4AP68366 448 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 HBA1P69905 142 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 CKAP4Q07065 602 aaKnown RBP12.93□□□□□ -0.34
SEC13-206ENST00000397102 PTGR1Q14914 329 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 CCDC153Q494R4 210 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 FAM153CQ494X1 144 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 TYW3Q6IPR3 259 aaKnown RBP12.93□□□□□ -0.34
SEC13-206ENST00000397102 THSD4Q6ZMP0 1018 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 TUBA1AQ71U36 451 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 DDIASQ8IXT1 998 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 CDK20Q8IZL9 346 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 CNPY4Q8N129 248 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 ARFGAP2Q8N6H7 521 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 TEX29Q8N6K0 151 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms