RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 PITPNBP48739 271 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 TMPRSS12Q86WS5 348 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 PLXDC1Q8IUK5 500 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 OR5J2Q8NH18 312 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 ACOT12Q8WYK0 555 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 IGHV3-20A0A0C4DH32 117 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 E9PI62 339 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 AHSA1O95433 338 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 TACR3P29371 465 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 ZNF136P52737 540 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 TAF13Q15543 124 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 LNX2Q8N448 690 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 ASB12Q8WXK4 309 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 LMF1Q96S06 567 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 DPAGT1Q9H3H5 408 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 TMEM138Q9NPI0 162 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 NUDT15Q9NV35 164 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 ZNF337Q9Y3M9 751 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 MDC1Q14676 2089 aaKnown RBP17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 ELK1P19419 428 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 GUCA1AP43080 201 aaPredicted RBP17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 TDGQ13569 410 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 PHF19Q5T6S3 580 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 SFXN4Q6P4A7 337 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 BRIX1Q8TDN6 353 aaKnown RBP17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 TXNDC15Q96J42 360 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 RSPO3Q9BXY4 272 aaPredicted RBP17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 KLRF1Q9NZS2 232 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 SATB2Q9UPW6 733 aa17.3■□□□□ 0.36
SMARCC2-203ENST00000394023 A6NL46 340 aa17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 ZNF264O43296 627 aa17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 FMO6PO60774 539 aa17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 ZNF823P16415 610 aa17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 GALEQ14376 348 aa17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 ESPNLQ6ZVH7 1005 aa17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 KRT77Q7Z794 578 aa17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 KLHL21Q9UJP4 597 aa17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 LSM2Q9Y333 95 aaKnown RBP17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 FAM172BPA6NC97 362 aa17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 PDCD5O14737 125 aa17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 PRPS1P60891 318 aa17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 PITPNAQ00169 270 aa17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 HEPHL1Q6MZM0 1159 aa17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 ANKRD9Q96BM1 317 aaPredicted RBP17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 FYTTD1Q96QD9 318 aaKnown RBP17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 ITGB1BP2Q9UKP3 347 aa17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 DTX4Q9Y2E6 619 aa17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 FAM47E-STBD1D6RA91 191 aa17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 SIX5Q8N196 739 aa17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 OR10H5Q8NGA6 315 aa17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 OR4M1Q8NGD0 313 aa17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 PELOQ9BRX2 385 aaKnown RBP17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 UCKL1Q9NWZ5 548 aa17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 PCOLCE2Q9UKZ9 415 aa17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 VDAC3Q9Y277 283 aa17.29■□□□□ 0.36
SMARCC2-203ENST00000394023 IGHV5-51A0A0C4DH38 117 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 HTR3EA5X5Y0 456 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 UTS2O95399 124 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 CCKBRP32239 447 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 SIRPAP78324 504 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 PSG6Q00889 435 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 SQSTM1Q13501 440 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 SF3B4Q15427 424 aaKnown RBP eCLIP17.28■□□□□ 0.361e-12■■■■■ 41.6
SMARCC2-203ENST00000394023 TRAM1Q15629 374 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 GARNL3Q5VVW2 1013 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 VASH1Q7L8A9 365 aaPredicted RBP17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 OR8H1Q8NGG4 311 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 ALG12Q9BV10 488 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 CACNG6Q9BXT2 260 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 NXF5Q9H1B4 397 aaKnown RBP17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 PLXND1Q9Y4D7 1925 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 IGHV4-34P06331 123 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 SDHBP21912 280 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 SNTB2Q13425 540 aaKnown RBP17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 WBP2NLQ6ICG8 309 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 MEIOBQ8N635 442 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 SLC35B4Q969S0 331 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 ACOXLQ9NUZ1 547 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 PLEKHB1Q9UF11 243 aaPredicted RBP17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 KCNE5Q9UJ90 142 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 SNRNP200O75643 2136 aaKnown RBP17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 GNALP38405 381 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 CAPZBP47756 277 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 CDC20Q12834 499 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 GFOD2Q3B7J2 385 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 LYPD4Q6UWN0 246 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 NUP54Q7Z3B4 507 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 POGLUT1Q8NBL1 392 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 BEST4Q8NFU0 473 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 JSRP1Q96MG2 331 aaPredicted RBP17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 ZNF304Q9HCX3 659 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 FLRT3Q9NZU0 649 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 GMEB2Q9UKD1 530 aa17.28■□□□□ 0.36
SMARCC2-203ENST00000394023 NKX2-2O95096 273 aa17.27■□□□□ 0.36
SMARCC2-203ENST00000394023 HOXC4P09017 264 aaPredicted RBP17.27■□□□□ 0.36
SMARCC2-203ENST00000394023 MNDAP41218 407 aa17.27■□□□□ 0.36
SMARCC2-203ENST00000394023 MAP3K8P41279 467 aa17.27■□□□□ 0.36
SMARCC2-203ENST00000394023 CHRDL2Q6WN34 429 aa17.27■□□□□ 0.36
SMARCC2-203ENST00000394023 MARCH3Q86UD3 253 aa17.27■□□□□ 0.36
SMARCC2-203ENST00000394023 ZNF440Q8IYI8 595 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms