RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 KLHL4Q9C0H6 718 aa11.9□□□□□ -0.5
USP44-202ENST00000393091 AQP7P3A6NL99 342 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 ZNF724A8MTY0 619 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 FPR1P21462 350 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 UQCRC1P31930 480 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 RTL6Q6ICC9 239 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 HMBOX1Q6NT76 420 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 PAQR6Q6TCH4 344 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 MAMDC2Q7Z304 686 aaPredicted RBP11.89□□□□□ -0.51
USP44-202ENST00000393091 RNF128Q8TEB7 428 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 TMEM45BQ96B21 275 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 BCO1Q9HAY6 547 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 C6orf203Q9P0P8 240 aaPredicted RBP11.89□□□□□ -0.51
USP44-202ENST00000393091 SLC6A5Q9Y345 797 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 CENPBD1B2RD01 187 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 E9PLN8 166 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 CASQ2O14958 399 aaPredicted RBP11.89□□□□□ -0.51
USP44-202ENST00000393091 DEAF1O75398 565 aaPredicted RBP11.89□□□□□ -0.51
USP44-202ENST00000393091 OR7A10O76100 309 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 GADD45GO95257 159 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 NUDT14O95848 222 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 IL18BPO95998 194 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 FCGR2AP12318 317 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 AGAP20933 346 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 FPR3P25089 353 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 SHC1P29353 583 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 RNF144AP50876 292 aaPredicted RBP11.89□□□□□ -0.51
USP44-202ENST00000393091 CCR4P51679 360 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 MYBPHQ13203 477 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 TAF11Q15544 211 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 C1QTNF12Q5T7M4 302 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 PODNL1Q6PEZ8 512 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 CADM2Q8N3J6 435 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 TAAR8Q969N4 342 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 CENPNQ96H22 339 aaPredicted RBP11.89□□□□□ -0.51
USP44-202ENST00000393091 SEPHS2Q99611 448 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 VKORC1Q9BQB6 163 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 PRR14Q9BWN1 585 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 LDAHQ9H6V9 325 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 KRCC1Q9NPI7 259 aaPredicted RBP11.89□□□□□ -0.51
USP44-202ENST00000393091 VNN3Q9NY84 501 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 B3GALT5Q9Y2C3 310 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 PTP4A3O75365 173 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 VAMP5O95183 116 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 CBLP22681 906 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 GXYLT1Q4G148 440 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 C1orf185Q5T7R7 199 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 OR10Q1Q8NGQ4 319 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 TMEM255BQ8WV15 326 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 USE1Q9NZ43 259 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 RASD1Q9Y272 281 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 MED31Q9Y3C7 131 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 CACNA1GO43497 2377 aa11.89□□□□□ -0.51
USP44-202ENST00000393091 hCG_2039718K7EN88 272 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 SS18L1O75177 396 aaPredicted RBP11.88□□□□□ -0.51
USP44-202ENST00000393091 RCBTB2O95199 551 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 FASP25445 335 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 RRM2P31350 389 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 CLDN20P56880 219 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 LTBQ06643 244 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 RNPS1Q15287 305 aaKnown RBP11.88□□□□□ -0.51
USP44-202ENST00000393091 DOLPP1Q86YN1 238 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 LRRC75AQ8NAA5 344 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 OR5K1Q8NHB7 308 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 TUBA1CQ9BQE3 449 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 HIF3AQ9Y2N7 669 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 FAM215AQ9Y5M1 114 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 TTLL8A6PVC2 850 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 MGRN1O60291 552 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 CST1P01037 141 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 RYKP34925 604 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 IFNGR2P38484 337 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 DIO1P49895 249 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 COX10Q12887 443 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 SEC23BQ15437 767 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 SGCBQ16585 318 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 OR10D3Q8NH80 312 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 KTI12Q96EK9 354 aaPredicted RBP11.88□□□□□ -0.51
USP44-202ENST00000393091 ALPK1Q96QP1 1244 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 BDH2Q9BUT1 245 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 MGAT4BQ9UQ53 548 aa11.88□□□□□ -0.51
USP44-202ENST00000393091 TRBV4-1A0A0J9YWV2 114 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 HBMQ6B0K9 141 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 TMEM211Q6ICI0 200 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 GFRALQ6UXV0 394 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 HIPK1Q86Z02 1210 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 PIGXQ8TBF5 258 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 GNPDA2Q8TDQ7 276 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 TM9SF2Q99805 663 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 SRXN1Q9BYN0 137 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 ING1Q9UK53 422 aaPredicted RBP11.87□□□□□ -0.51
USP44-202ENST00000393091 ZC3H12DA2A288 527 aaKnown RBP11.87□□□□□ -0.51
USP44-202ENST00000393091 FIGNL2A6NMB9 653 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 SHISA8B8ZZ34 492 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 SLC19A2O60779 497 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 OR2A2Q6IF42 318 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 RPL13AP3Q6NVV1 102 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 PARP8Q8N3A8 854 aa11.87□□□□□ -0.51
USP44-202ENST00000393091 NAA11Q9BSU3 229 aaPredicted RBP11.87□□□□□ -0.51
USP44-202ENST00000393091 REEP1Q9H902 201 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms