RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 FBXL2Q9UKC9 423 aa12.22□□□□□ -0.45
LCA5-202ENST00000392959 HHLA1C9JL84 531 aa12.22□□□□□ -0.45
LCA5-202ENST00000392959 CLEC2LP0C7M8 214 aa12.22□□□□□ -0.45
LCA5-202ENST00000392959 NFYAP23511 347 aaPredicted RBP12.22□□□□□ -0.45
LCA5-202ENST00000392959 SLC35A2P78381 396 aa12.22□□□□□ -0.45
LCA5-202ENST00000392959 SRYQ05066 204 aa12.22□□□□□ -0.45
LCA5-202ENST00000392959 ZNF852Q6ZMS4 543 aa12.22□□□□□ -0.45
LCA5-202ENST00000392959 VRK3Q8IV63 474 aa12.22□□□□□ -0.45
LCA5-202ENST00000392959 SVBPQ8N300 66 aa12.22□□□□□ -0.45
LCA5-202ENST00000392959 OR6T1Q8NGN1 323 aa12.22□□□□□ -0.45
LCA5-202ENST00000392959 OR51Q1Q8NH59 317 aa12.22□□□□□ -0.45
LCA5-202ENST00000392959 SORCS2Q96PQ0 1159 aa12.22□□□□□ -0.45
LCA5-202ENST00000392959 PGAP2Q9UHJ9 254 aa12.22□□□□□ -0.45
LCA5-202ENST00000392959 SRPK3Q9UPE1 567 aa12.22□□□□□ -0.45
LCA5-202ENST00000392959 IGLV3-10A0A075B6K4 115 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 TRDV1A0A1B0GX56 115 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 PPP3CBP16298 524 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 MSX1P28360 303 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 ETV6P41212 452 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 DEFB103AP81534 67 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 FAPQ12884 760 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 SLC14A1Q13336 389 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 FAM111BQ6SJ93 734 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 SHISA6Q6ZSJ9 500 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 NLRP8Q86W28 1048 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 MFSD9Q8NBP5 474 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 DNAAF1Q8NEP3 725 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 FGF13Q92913 245 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 TXNDC15Q96J42 360 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 MICU1Q9BPX6 476 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 CDH20Q9HBT6 801 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 ASIC5Q9NY37 505 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 ANKRD33BA6NCL7 494 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 KRBOX1C9JBD0 128 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 VASPP50552 380 aaPredicted RBP12.21□□□□□ -0.45
LCA5-202ENST00000392959 CLVS2Q5SYC1 327 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 C18orf63Q68DL7 685 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 NIPAL3Q6P499 406 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 IDO2Q6ZQW0 420 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 NANOS1Q8WY41 292 aaKnown RBP12.21□□□□□ -0.45
LCA5-202ENST00000392959 FAM3CQ92520 227 aa12.21□□□□□ -0.45
LCA5-202ENST00000392959 TTLL8A6PVC2 850 aa12.21□□□□□ -0.46
LCA5-202ENST00000392959 ZNF264O43296 627 aa12.21□□□□□ -0.46
LCA5-202ENST00000392959 ACTL6BO94805 426 aa12.21□□□□□ -0.46
LCA5-202ENST00000392959 TIMP1P01033 207 aa12.21□□□□□ -0.46
LCA5-202ENST00000392959 MAKP20794 623 aa12.21□□□□□ -0.46
LCA5-202ENST00000392959 HTR1FP30939 366 aa12.21□□□□□ -0.46
LCA5-202ENST00000392959 SLC6A11P48066 632 aa12.21□□□□□ -0.46
LCA5-202ENST00000392959 GPLD1P80108 840 aa12.21□□□□□ -0.46
LCA5-202ENST00000392959 TNFRSF17Q02223 184 aa12.21□□□□□ -0.46
LCA5-202ENST00000392959 FGL2Q14314 439 aa12.21□□□□□ -0.46
LCA5-202ENST00000392959 BCDIN3DQ7Z5W3 292 aaKnown RBP12.21□□□□□ -0.46
LCA5-202ENST00000392959 FAM160A2Q8N612 972 aaPredicted RBP12.21□□□□□ -0.46
LCA5-202ENST00000392959 OR52I1Q8NGK6 324 aa12.21□□□□□ -0.46
LCA5-202ENST00000392959 SLC35B4Q969S0 331 aa12.21□□□□□ -0.46
LCA5-202ENST00000392959 MALSU1Q96EH3 234 aa12.21□□□□□ -0.46
LCA5-202ENST00000392959 ZIC5Q96T25 663 aa12.21□□□□□ -0.46
LCA5-202ENST00000392959 AMBRA1Q9C0C7 1298 aa12.21□□□□□ -0.46
LCA5-202ENST00000392959 GLIPR2Q9H4G4 154 aa12.21□□□□□ -0.46
LCA5-202ENST00000392959 GALNT9Q9HCQ5 603 aa12.21□□□□□ -0.46
LCA5-202ENST00000392959 EHFQ9NZC4 300 aa12.21□□□□□ -0.46
LCA5-202ENST00000392959 PCDHGA6Q9Y5G7 932 aa12.21□□□□□ -0.46
LCA5-202ENST00000392959 TMEM212A6NML5 194 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 CD300LBA8K4G0 201 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 TNFRSF10AO00220 468 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 SOCS6O14544 535 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 FBXO24O75426 580 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 CA3P07451 260 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 SNRNP70P08621 437 aaKnown RBP12.2□□□□□ -0.46
LCA5-202ENST00000392959 IDUAP35475 653 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 RAB31Q13636 194 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 Q499Y3 187 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 RTL6Q6ICC9 239 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 MRPL43Q8N983 215 aaKnown RBP12.2□□□□□ -0.46
LCA5-202ENST00000392959 POC1BQ8TC44 478 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 SLC22A12Q96S37 553 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 A4GALTQ9NPC4 353 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 NOX4Q9NPH5 578 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 CLEC2DQ9UHP7 191 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 MOKQ9UQ07 419 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 SLC22A23A1A5C7 686 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 PIP5K1CO60331 668 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 POLR2HP52434 150 aaKnown RBP12.2□□□□□ -0.46
LCA5-202ENST00000392959 SMAD2Q15796 467 aaKnown RBP12.2□□□□□ -0.46
LCA5-202ENST00000392959 NDUFAF7Q7L592 441 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 LIX1LQ8IVB5 337 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 CADM3Q8N126 398 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 ZFAND1Q8TCF1 268 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 PCNPQ8WW12 178 aaKnown RBP12.2□□□□□ -0.46
LCA5-202ENST00000392959 FRZBQ92765 325 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 LUZP4Q9P127 313 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 CDC14CA4D256 554 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 FADS1O60427 444 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 DBHP09172 617 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 PKLRP30613 574 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 FOXK2Q01167 660 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 TNK1Q13470 666 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 MELKQ14680 651 aa12.2□□□□□ -0.46
LCA5-202ENST00000392959 CNN3Q15417 329 aaKnown RBP12.2□□□□□ -0.46
LCA5-202ENST00000392959 SLC9A3R2Q15599 337 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms