RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 IL37Q9NZH6 218 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 PIPOXQ9P0Z9 390 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 LUZP4Q9P127 313 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 TXNDC16Q9P2K2 825 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 SPRR3Q9UBC9 169 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 MTRRQ9UBK8 725 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 CNOT8Q9UFF9 292 aaKnown RBP-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 HMGXB4Q9UGU5 601 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 TBX20Q9UMR3 447 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 SAMD4AQ9UPU9 718 aaKnown RBP-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 AGTPBP1Q9UPW5 1226 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 NCKAP1Q9Y2A7 1128 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC9A8Q9Y2E8 581 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 PADI2Q9Y2J8 665 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 NSG2Q9Y328 171 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 PLLPQ9Y342 182 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 L3MBTL1Q9Y468 752 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 CADP27708 2225 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 SETD1AO15047 1707 aaKnown RBP-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 APOBP04114 4563 aaKnown RBP-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 ADAMTS13Q76LX8 1427 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 TAF1P21675 1872 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 GBF1Q92538 1859 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF106Q9H2Y7 1883 aaKnown RBP-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 PLEKHH1Q9ULM0 1364 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CUBNO60494 3623 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CMYA5Q8N3K9 4069 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CELSR3Q9NYQ7 3312 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 NFASCO94856 1347 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 AFF2P51816 1311 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 GPATCH8Q9UKJ3 1502 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 SPTBN2O15020 2390 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CFAP65Q6ZU64 1925 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TICRRQ7Z2Z1 1910 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TEX15Q9BXT5 2789 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 LOC102724200A0A096LPH7 203 aaPredicted RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TRBV6-7A0A0A0MS04 114 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 IGHV3-49A0A0A0MS15 119 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 NPIPA5A0A0B4J1W7 369 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 IGHV1OR15-9A0A0B4J2B8 117 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 LOC107984156A0A0G2JMH3 177 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TRBV7-9A0A0J9YWB2 115 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 A0A1B0GVL5 298 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 GTPBP10A4D1E9 387 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 MEI4A8MW99 385 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CLDN25C9JDP6 229 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 H0YJW9 148 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CCER2I3L3R5 266 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CYB561D2O14569 222 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 PRMT5O14744 637 aaPredicted RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TSPAN4O14817 238 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 NCR3O14931 201 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 PPM1GO15355 546 aaPredicted RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TNRC18O15417 2968 aaPredicted RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC31A2O15432 143 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 RNF113AO15541 343 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 ZW10O43264 779 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CHST10O43529 356 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 OR7C2O60412 319 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 ACSL4O60488 711 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TPST2O60704 377 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 PAGE4O60829 102 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 SCRG1O75711 98 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 ATP6AP2O75787 350 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TM7SF2O76062 418 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 LRATO95237 230 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 MT-CO2P00403 227 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 LALBAP00709 142 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 IGHV3-53P01767 116 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 IGHG2P01859 326 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 IGHG4P01861 327 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 HLA-DPB1P04440 258 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 SERPING1P05155 500 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 ALPPP05187 535 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 SRPRAP08240 638 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 VIMP08670 466 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CNPP09543 421 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 LINGO3P0C6S8 592 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 HSPA1AP0DMV8 641 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 HSPA1BP0DMV9 641 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 U2AF1L5P0DN76 240 aaPredicted RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 SAGP10523 405 aaPredicted RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 ALPPL2P10696 532 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 MYL6BP14649 208 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 POU2F1P14859 743 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 ALOX12P18054 663 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 ATF1P18846 271 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CCNA2P20248 432 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CASTP20810 708 aaKnown RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CNR1P21554 472 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 DTYMKP23919 212 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 MPZP25189 248 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 ELK4P28324 431 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CST5P28325 142 aaPredicted RBP-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 CD80P33681 288 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 PCK1P35558 622 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 PRPHP41219 470 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 TSPAN7P41732 249 aa-0.57□□□□□ -2.5
TRAJ28-201ENST00000390509 PRLHRP49683 370 aa-0.57□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms