RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 UGT2B17O75795 530 aa14.95□□□□□ -0.02
HMGN1-203ENST00000380748 TFP02787 698 aa14.95□□□□□ -0.02
HMGN1-203ENST00000380748 GSTA1P08263 222 aa14.95□□□□□ -0.02
HMGN1-203ENST00000380748 SNRPAP09012 282 aaKnown RBP14.95□□□□□ -0.02
HMGN1-203ENST00000380748 ARAFP10398 606 aa14.95□□□□□ -0.02
HMGN1-203ENST00000380748 IMPDH2P12268 514 aa14.95□□□□□ -0.02
HMGN1-203ENST00000380748 RYKP34925 604 aa14.95□□□□□ -0.02
HMGN1-203ENST00000380748 RPS26P62854 115 aaKnown RBP14.95□□□□□ -0.02
HMGN1-203ENST00000380748 UBA52P62987 128 aaKnown RBP14.95□□□□□ -0.02
HMGN1-203ENST00000380748 SLC7A5Q01650 507 aa14.95□□□□□ -0.02
HMGN1-203ENST00000380748 C3orf36Q3SXR2 165 aa14.95□□□□□ -0.02
HMGN1-203ENST00000380748 SPDYE7PQ495Y7 208 aa14.95□□□□□ -0.02
HMGN1-203ENST00000380748 ATP6AP1LQ52LC2 224 aa14.95□□□□□ -0.02
HMGN1-203ENST00000380748 RFTN2Q52LD8 501 aaPredicted RBP14.95□□□□□ -0.02
HMGN1-203ENST00000380748 CLEC6AQ6EIG7 209 aa14.95□□□□□ -0.02
HMGN1-203ENST00000380748 EIF3MQ7L2H7 374 aaKnown RBP14.95□□□□□ -0.02
HMGN1-203ENST00000380748 GRINAQ7Z429 371 aa14.95□□□□□ -0.02
HMGN1-203ENST00000380748 OR7A2PQ8NGA2 310 aa14.95□□□□□ -0.02
HMGN1-203ENST00000380748 BCL2L2Q92843 193 aaPredicted RBP14.95□□□□□ -0.02
HMGN1-203ENST00000380748 NAA11Q9BSU3 229 aaPredicted RBP14.95□□□□□ -0.02
HMGN1-203ENST00000380748 KCNF1Q9H3M0 494 aa14.95□□□□□ -0.02
HMGN1-203ENST00000380748 MKLN1Q9UL63 735 aa14.95□□□□□ -0.02
HMGN1-203ENST00000380748 A0A096LPE4 126 aa14.94□□□□□ -0.02
HMGN1-203ENST00000380748 ARPC4-TTLL3A0A0A6YYG9 625 aa14.94□□□□□ -0.02
HMGN1-203ENST00000380748 A0A1W2PPZ6 126 aa14.94□□□□□ -0.02
HMGN1-203ENST00000380748 EIF1BO60739 113 aaKnown RBP14.94□□□□□ -0.02
HMGN1-203ENST00000380748 COL8A2P25067 703 aa14.94□□□□□ -0.02
HMGN1-203ENST00000380748 PGM1P36871 562 aa14.94□□□□□ -0.02
HMGN1-203ENST00000380748 CLK1P49759 484 aaKnown RBP14.94□□□□□ -0.02
HMGN1-203ENST00000380748 SLC35A1P78382 337 aa14.94□□□□□ -0.02
HMGN1-203ENST00000380748 FOXL1Q12952 345 aa14.94□□□□□ -0.02
HMGN1-203ENST00000380748 MAPK14Q16539 360 aa14.94□□□□□ -0.02
HMGN1-203ENST00000380748 EMBQ6PCB8 327 aa14.94□□□□□ -0.02
HMGN1-203ENST00000380748 FRMD7Q6ZUT3 714 aa14.94□□□□□ -0.02
HMGN1-203ENST00000380748 LINGO2Q7L985 606 aa14.94□□□□□ -0.02
HMGN1-203ENST00000380748 FAM71CQ8NEG0 241 aa14.94□□□□□ -0.02
HMGN1-203ENST00000380748 OR9K2Q8NGE7 335 aa14.94□□□□□ -0.02
HMGN1-203ENST00000380748 OR5AK3PQ8NH89 298 aa14.94□□□□□ -0.02
HMGN1-203ENST00000380748 PSMA8Q8TAA3 256 aa14.94□□□□□ -0.02
HMGN1-203ENST00000380748 MTERF3Q96E29 417 aa14.94□□□□□ -0.02
HMGN1-203ENST00000380748 ANKRD27Q96NW4 1050 aa14.94□□□□□ -0.02
HMGN1-203ENST00000380748 ALKBH3Q96Q83 286 aaPredicted RBP14.94□□□□□ -0.02
HMGN1-203ENST00000380748 NELFAQ9H3P2 528 aa14.94□□□□□ -0.02
HMGN1-203ENST00000380748 SERHL2Q9H4I8 314 aa14.94□□□□□ -0.02
HMGN1-203ENST00000380748 G6PC2Q9NQR9 355 aa14.94□□□□□ -0.02
HMGN1-203ENST00000380748 WNK2Q9Y3S1 2297 aa14.93□□□□□ -0.02
HMGN1-203ENST00000380748 TRAV20A0A0B4J274 112 aa14.93□□□□□ -0.02
HMGN1-203ENST00000380748 OR6C65A6NJZ3 312 aa14.93□□□□□ -0.02
HMGN1-203ENST00000380748 VSTM5A8MXK1 200 aa14.93□□□□□ -0.02
HMGN1-203ENST00000380748 SLC28A1O00337 649 aa14.93□□□□□ -0.02
HMGN1-203ENST00000380748 SCAMP2O15127 329 aaKnown RBP14.93□□□□□ -0.02
HMGN1-203ENST00000380748 KRT33AO76009 404 aa14.93□□□□□ -0.02
HMGN1-203ENST00000380748 C6orf47O95873 294 aa14.93□□□□□ -0.02
HMGN1-203ENST00000380748 HKR1P10072 659 aa14.93□□□□□ -0.02
HMGN1-203ENST00000380748 UROSP10746 265 aa14.93□□□□□ -0.02
HMGN1-203ENST00000380748 LAMP1P11279 417 aa14.93□□□□□ -0.02
HMGN1-203ENST00000380748 LMO4P61968 165 aa14.93□□□□□ -0.02
HMGN1-203ENST00000380748 LIPMQ5VYY2 423 aa14.93□□□□□ -0.02
HMGN1-203ENST00000380748 R3HCC1LQ7Z5L2 792 aaKnown RBP14.93□□□□□ -0.02
HMGN1-203ENST00000380748 C1QL2Q7Z5L3 287 aa14.93□□□□□ -0.02
HMGN1-203ENST00000380748 ABHD12BQ7Z5M8 362 aaPredicted RBP14.93□□□□□ -0.02
HMGN1-203ENST00000380748 RELL1Q8IUW5 271 aa14.93□□□□□ -0.02
HMGN1-203ENST00000380748 OR5P2Q8WZ92 322 aa14.93□□□□□ -0.02
HMGN1-203ENST00000380748 ATP6V1HQ9UI12 483 aa14.93□□□□□ -0.02
HMGN1-203ENST00000380748 PPIAL4AQ9Y536 164 aa14.93□□□□□ -0.02
HMGN1-203ENST00000380748 TMED7-TICAM2A0A0A6YYA0 188 aa14.92□□□□□ -0.02
HMGN1-203ENST00000380748 IGHV2OR16-5A0A0B4J2B6 119 aa14.92□□□□□ -0.02
HMGN1-203ENST00000380748 TMEM72A0PK05 275 aa14.92□□□□□ -0.02
HMGN1-203ENST00000380748 ZNF587BE7ETH6 402 aa14.92□□□□□ -0.02
HMGN1-203ENST00000380748 STX11O75558 287 aa14.92□□□□□ -0.02
HMGN1-203ENST00000380748 IGKV3-15P01624 115 aa14.92□□□□□ -0.02
HMGN1-203ENST00000380748 HPXP02790 462 aa14.92□□□□□ -0.02
HMGN1-203ENST00000380748 BCKDHAP12694 445 aa14.92□□□□□ -0.02
HMGN1-203ENST00000380748 ADRA2CP18825 462 aa14.92□□□□□ -0.02
HMGN1-203ENST00000380748 TCN1P20061 433 aaPredicted RBP14.92□□□□□ -0.02
HMGN1-203ENST00000380748 PAX7P23759 505 aa14.92□□□□□ -0.02
HMGN1-203ENST00000380748 FKBP2P26885 142 aaKnown RBP14.92□□□□□ -0.02
HMGN1-203ENST00000380748 HPCAL1P37235 193 aa14.92□□□□□ -0.02
HMGN1-203ENST00000380748 PLAURQ03405 335 aa14.92□□□□□ -0.02
HMGN1-203ENST00000380748 MSMPQ1L6U9 139 aa14.92□□□□□ -0.02
HMGN1-203ENST00000380748 OTUD3Q5T2D3 398 aaPredicted RBP14.92□□□□□ -0.02
HMGN1-203ENST00000380748 PAQR6Q6TCH4 344 aa14.92□□□□□ -0.02
HMGN1-203ENST00000380748 TIFABQ6ZNK6 161 aa14.92□□□□□ -0.02
HMGN1-203ENST00000380748 LCA5Q86VQ0 697 aa14.92□□□□□ -0.02
HMGN1-203ENST00000380748 BPIFB2Q8N4F0 458 aa14.92□□□□□ -0.02
HMGN1-203ENST00000380748 TEX29Q8N6K0 151 aa14.92□□□□□ -0.02
HMGN1-203ENST00000380748 SFXN5Q8TD22 340 aa14.92□□□□□ -0.02
HMGN1-203ENST00000380748 TMPRSS13Q9BYE2 586 aa14.92□□□□□ -0.02
HMGN1-203ENST00000380748 TUBB1Q9H4B7 451 aa14.92□□□□□ -0.02
HMGN1-203ENST00000380748 PCDHGB4Q9UN71 923 aa14.92□□□□□ -0.02
HMGN1-203ENST00000380748 TMED7Q9Y3B3 224 aa14.92□□□□□ -0.02
HMGN1-203ENST00000380748 ZC3H12DA2A288 527 aaKnown RBP14.91□□□□□ -0.02
HMGN1-203ENST00000380748 G3V2L1 256 aa14.91□□□□□ -0.02
HMGN1-203ENST00000380748 H3BQF6 201 aa14.91□□□□□ -0.02
HMGN1-203ENST00000380748 LSM1O15116 133 aaKnown RBP14.91□□□□□ -0.02
HMGN1-203ENST00000380748 BCL10O95999 233 aa14.91□□□□□ -0.02
HMGN1-203ENST00000380748 ACHEP22303 614 aa14.91□□□□□ -0.02
HMGN1-203ENST00000380748 SELENOPP49908 381 aa14.91□□□□□ -0.02
HMGN1-203ENST00000380748 SNTB2Q13425 540 aaKnown RBP14.91□□□□□ -0.02
HMGN1-203ENST00000380748 GALNTL6Q49A17 601 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms