RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 RFKQ969G6 155 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 MOGAT1Q96PD6 335 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 PRODHO43272 600 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 NPIPB7O75200 414 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 SNX4O95219 450 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 MT-ATP6P00846 226 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 MT-ND2P03891 347 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 HIST1H2ABP04908 130 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 ASAH2BP0C7U1 165 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 LIFP15018 202 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 PCMT1P22061 227 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 RPS5P46782 204 aaKnown RBP23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 MVKQ03426 396 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 PMS2P3Q13401 168 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 ZNF468Q5VIY5 522 aaPredicted RBP23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 BORAQ6PGQ7 559 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 DPY19L2P2Q6ZN68 376 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 HIST3H2AQ7L7L0 130 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 CLEC1AQ8NC01 280 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 HIST1H2ACQ93077 130 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 NTNG2Q96CW9 530 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 NDEL1Q9GZM8 345 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 FN3KQ9H479 309 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 CMC2Q9NRP2 79 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 STMN3Q9NZ72 180 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 CHRNA9Q9UGM1 479 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 HIF3AQ9Y2N7 669 aa23.84■■□□□ 1.41
ATPAF1-202ENST00000371937 KDM4EB2RXH2 506 aaPredicted RBP23.83■■□□□ 1.41
ATPAF1-202ENST00000371937 NOS3P29474 1203 aa23.83■■□□□ 1.41
ATPAF1-202ENST00000371937 CYB561P49447 251 aa23.83■■□□□ 1.41
ATPAF1-202ENST00000371937 PLPPR5Q32ZL2 321 aa23.83■■□□□ 1.41
ATPAF1-202ENST00000371937 FOXB2Q5VYV0 432 aa23.83■■□□□ 1.41
ATPAF1-202ENST00000371937 ARHGAP11AQ6P4F7 1023 aa23.83■■□□□ 1.41
ATPAF1-202ENST00000371937 BCDIN3DQ7Z5W3 292 aaKnown RBP23.83■■□□□ 1.41
ATPAF1-202ENST00000371937 TMIGD2Q96BF3 282 aa23.83■■□□□ 1.41
ATPAF1-202ENST00000371937 LHPPQ9H008 270 aa23.83■■□□□ 1.41
ATPAF1-202ENST00000371937 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP23.83■■□□□ 1.41
ATPAF1-202ENST00000371937 HRH3Q9Y5N1 445 aa23.83■■□□□ 1.41
ATPAF1-202ENST00000371937 OR2T1O43869 369 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 WISP1O95388 367 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 PPP1R3DO95685 299 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 P04436 131 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 DBTP11182 482 aaKnown RBP23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 RPL4P36578 427 aaKnown RBP23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 ZNF91Q05481 1191 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 LTBQ06643 244 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 INPP5JQ15735 1006 aaPredicted RBP23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 FAM69AQ5T7M9 428 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 C1orf140Q5VVS0 124 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 BEST3Q8N1M1 668 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 C1GALT1C1Q96EU7 318 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 ABI3Q9P2A4 366 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 FBXL2Q9UKC9 423 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 ZC3H12DA2A288 527 aaKnown RBP23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 RIIAD1A6NNX1 92 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 BLOC1S5-TXNDC5H3BN57 136 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 ZNF208O43345 1280 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 BGLAPP02818 100 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 STSP08842 583 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 HK1P19367 917 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 ITGA3P26006 1051 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 MASP1P48740 699 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 FOXF1Q12946 379 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 RTP5Q14D33 572 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 SLC35F1Q5T1Q4 408 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 ABHD17BQ5VST6 288 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 MAMDC2Q7Z304 686 aaPredicted RBP23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 PROK2Q9HC23 129 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 WDR70Q9NW82 654 aa23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 H2AFY2Q9P0M6 372 aaPredicted RBP23.82■■□□□ 1.4
ATPAF1-202ENST00000371937 CEP250Q9BV73 2442 aa23.81■■□□□ 1.4
ATPAF1-202ENST00000371937 MPDZO75970 2070 aa23.81■■□□□ 1.4
ATPAF1-202ENST00000371937 A0A087WZY1 265 aa23.81■■□□□ 1.4
ATPAF1-202ENST00000371937 M0R3G1 203 aa23.81■■□□□ 1.4
ATPAF1-202ENST00000371937 AHSA1O95433 338 aa23.81■■□□□ 1.4
ATPAF1-202ENST00000371937 SLC2A10O95528 541 aa23.81■■□□□ 1.4
ATPAF1-202ENST00000371937 IFNGP01579 166 aa23.81■■□□□ 1.4
ATPAF1-202ENST00000371937 C21orf33P30042 268 aaPredicted RBP23.81■■□□□ 1.4
ATPAF1-202ENST00000371937 EIF1P41567 113 aaKnown RBP23.81■■□□□ 1.4
ATPAF1-202ENST00000371937 RAB39AQ14964 217 aa23.81■■□□□ 1.4
ATPAF1-202ENST00000371937 AADACL4Q5VUY2 407 aa23.81■■□□□ 1.4
ATPAF1-202ENST00000371937 NXNL2Q5VZ03 156 aa23.81■■□□□ 1.4
ATPAF1-202ENST00000371937 MDGA2Q7Z553 956 aa23.81■■□□□ 1.4
ATPAF1-202ENST00000371937 NANOGNBQ7Z5D8 188 aa23.81■■□□□ 1.4
ATPAF1-202ENST00000371937 OR6S1Q8NH40 331 aa23.81■■□□□ 1.4
ATPAF1-202ENST00000371937 DGCR14Q96DF8 476 aaKnown RBP23.81■■□□□ 1.4
ATPAF1-202ENST00000371937 ERMAPQ96PL5 475 aaPredicted RBP23.81■■□□□ 1.4
ATPAF1-202ENST00000371937 GPX7Q96SL4 187 aaPredicted RBP23.81■■□□□ 1.4
ATPAF1-202ENST00000371937 SERINC1Q9NRX5 453 aa23.81■■□□□ 1.4
ATPAF1-202ENST00000371937 SACM1LQ9NTJ5 587 aa23.81■■□□□ 1.4
ATPAF1-202ENST00000371937 ANKRD10Q9NXR5 420 aa23.81■■□□□ 1.4
ATPAF1-202ENST00000371937 MCIDASD6RGH6 385 aa23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 SNPHO15079 494 aa23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 IDH3BO43837 385 aa23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 TUBA3CQ13748 450 aa23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 CXXC5Q7LFL8 322 aaKnown RBP23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 OR1J4Q8NGS1 313 aa23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 RORBQ92753 470 aa23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 DDIT4LQ96D03 193 aa23.8■■□□□ 1.4
ATPAF1-202ENST00000371937 TMEM41AQ96HV5 264 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms