RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 DUSP21Q9H596 190 aa7.99□□□□□ -1.13
SNX27-201ENST00000368838 NDUFA13Q9P0J0 144 aa7.99□□□□□ -1.13
SNX27-201ENST00000368838 KIF17Q9P2E2 1029 aa7.99□□□□□ -1.13
SNX27-201ENST00000368838 YARS2Q9Y2Z4 477 aaKnown RBP7.99□□□□□ -1.13
SNX27-201ENST00000368838 ZNF407Q9C0G0 2248 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 NINQ8N4C6 2090 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 FREM3P0C091 2139 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 DNAJC13O75165 2243 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 MYOCOSA0A1B0GUC4 107 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 CLDN24A6NM45 220 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 BCKDKO14874 412 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 OR10H3O60404 316 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 REM1O75628 298 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 WDPCPO95876 746 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 SERPINA7P05543 415 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 GNAO1P09471 354 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 TSPAN19P0C672 248 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 HPGDP15428 266 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 CHMP24386 653 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 MST1P26927 711 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 IL12BP29460 328 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 TTKP33981 857 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 SLC1A3P43003 542 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 HTR3AP46098 478 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 YAP1P46937 504 aaKnown RBP7.98□□□□□ -1.13
SNX27-201ENST00000368838 GIPRP48546 466 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 SLC9A3P48764 834 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 P2RX1P51575 399 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 TDGF1P3P51864 188 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 PER3P56645 1201 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 COPZ1P61923 177 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 CDK5Q00535 292 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 CD47Q08722 323 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 C17orf67Q0P5P2 114 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 PPP1R8Q12972 351 aaKnown RBP7.98□□□□□ -1.13
SNX27-201ENST00000368838 MAD2L1BPQ15013 274 aaPredicted RBP7.98□□□□□ -1.13
SNX27-201ENST00000368838 TMEM44Q2T9K0 475 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 ZNF791Q3KP31 576 aaPredicted RBP7.98□□□□□ -1.13
SNX27-201ENST00000368838 FGD3Q5JSP0 725 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 C6orf141Q5SZD1 244 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 C12orf73Q69YU5 71 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 SP5Q6BEB4 398 aaPredicted RBP7.98□□□□□ -1.13
SNX27-201ENST00000368838 GFRALQ6UXV0 394 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 RRM2BQ7LG56 351 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 OLIG3Q7RTU3 272 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 OR8J1Q8NGP2 316 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 OR5W2Q8NH69 310 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 TMEM239Q8WW34 195 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 ST8SIA1Q92185 356 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 SGCZQ96LD1 299 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 CNBD2Q96M20 576 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 SIGLEC11Q96RL6 698 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 LMF1Q96S06 567 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 NIPSNAP1Q9BPW8 284 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 PRRG3Q9BZD7 231 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 CCNB1IP1Q9NPC3 277 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 SDHAF3Q9NRP4 125 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 ANKRD10Q9NXR5 420 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 BAIAP2Q9UQB8 552 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 GMPPBQ9Y5P6 360 aa7.98□□□□□ -1.13
SNX27-201ENST00000368838 DCHS2Q6V1P9 2916 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 PDZD2O15018 2839 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 HCFC1P51610 2035 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 POLQO75417 2590 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 MED13LQ71F56 2210 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 A0A087WXM4 84 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 TRGV8A0A0C4DH27 118 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 TRBV11-1A0A0K0K1C0 115 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 A0A1B0GWA3 101 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 ENO4A6NNW6 628 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 A8MUA0 341 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 TP53I11O14683 189 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 MAN1A2O60476 641 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 ADAM11O75078 769 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 RPSAP08865 295 aaKnown RBP7.97□□□□□ -1.13
SNX27-201ENST00000368838 PRG2P13727 222 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 APEHP13798 732 aaKnown RBP7.97□□□□□ -1.13
SNX27-201ENST00000368838 PGCP20142 388 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 CRHBPP24387 322 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 ADH6P28332 368 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 EVI2BP34910 448 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 GAS1P54826 345 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 NR1H2P55055 460 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 CDC42P60953 191 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 CDK5R2Q13319 367 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 TMED1Q13445 227 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 PTGES3Q15185 160 aaKnown RBP7.97□□□□□ -1.13
SNX27-201ENST00000368838 MEDAGQ5VYS4 303 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 RNLSQ5VYX0 342 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 SLC30A6Q6NXT4 461 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 APOOLQ6UXV4 268 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 ZNF730Q6ZMV8 503 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 ATG4DQ86TL0 474 aaPredicted RBP7.97□□□□□ -1.13
SNX27-201ENST00000368838 OR9Q2Q8NGE9 314 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 OR52J3Q8NH60 311 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 CYGBQ8WWM9 190 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 IPCEF1Q8WWN9 437 aaPredicted RBP7.97□□□□□ -1.13
SNX27-201ENST00000368838 OSTF1Q92882 214 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 C3orf49Q96BT1 292 aa7.97□□□□□ -1.13
SNX27-201ENST00000368838 SPACA9Q96E40 222 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms