RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 RNF170Q96K19 258 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 HS6ST2Q96MM7 605 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 ATF6BQ99941 703 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 CDCA4Q9BXL8 241 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 PRRG4Q9BZD6 226 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 GPATCH2Q9NW75 528 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 LSM5Q9Y4Y9 91 aaKnown RBP10.05□□□□□ -0.8
EBF3-202ENST00000368648 URGCP-MRPS24S4R325 110 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 V9GY05 133 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 ATG2BQ96BY7 2078 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 EMC8O43402 210 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 TSPAN15O95858 294 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 RORAP35398 523 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 SLC9A3R2Q15599 337 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 ZNF674Q2M3X9 581 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 LIPIQ6XZB0 460 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 TMEM99Q8N816 258 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 STEAP2Q8NFT2 490 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 OR4K14Q8NGD5 310 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 OR5T2Q8NGG2 359 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 TCTEX1D2Q8WW35 142 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 NR4A3Q92570 626 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 BPIFA2Q96DR5 249 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 ELP4Q96EB1 424 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 LINC00052Q96N35 136 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 NOX4Q9NPH5 578 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 KLF15Q9UIH9 416 aa10.05□□□□□ -0.8
EBF3-202ENST00000368648 ACOT7O00154 380 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 GPR171O14626 319 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 SCO2O43819 266 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 CSTAP01040 98 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 IFNA21P01568 189 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 TRAPPC2P0DI81 140 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 TRAPPC2BP0DI82 140 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 GLI4P10075 376 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 ZNF20P17024 532 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 HMGA1P17096 107 aaKnown RBP10.04□□□□□ -0.8
EBF3-202ENST00000368648 EIF5AP63241 154 aaKnown RBP10.04□□□□□ -0.8
EBF3-202ENST00000368648 BCL2A1Q16548 175 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 SLC25A35Q3KQZ1 300 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 SPIN3Q5JUX0 258 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 LRIF1Q5T3J3 769 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 CPXM2Q8N436 756 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 TMEM239Q8WW34 195 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 CDS1Q92903 461 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 SLAMF9Q96A28 289 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 TRMT61AQ96FX7 289 aaKnown RBP10.04□□□□□ -0.8
EBF3-202ENST00000368648 INTS14Q96SY0 518 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 BARHL1Q9BZE3 327 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 RXFP3Q9NSD7 469 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 EPHA6Q9UF33 1036 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 SUSD2Q9UGT4 822 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 GLS2Q9UI32 602 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 DRGXA6NNA5 263 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 PRSS44E7EML9 344 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 LCMT2O60294 686 aaKnown RBP10.04□□□□□ -0.8
EBF3-202ENST00000368648 KLK3P07288 261 aaPredicted RBP10.04□□□□□ -0.8
EBF3-202ENST00000368648 PPP3CBP16298 524 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 HNRNPA2B1P22626 353 aaKnown RBP10.04□□□□□ -0.8
EBF3-202ENST00000368648 IMPA1P29218 277 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 MVDP53602 400 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 DEFA6Q01524 100 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 ZNF511Q8NB15 262 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 OR5AK2Q8NH90 309 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 STK35Q8TDR2 534 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 PRRC1Q96M27 445 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 PTCHD1Q96NR3 888 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 VRK1Q99986 396 aaPredicted RBP10.04□□□□□ -0.8
EBF3-202ENST00000368648 SLC6A20Q9NP91 592 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 EMC7Q9NPA0 242 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 NDUFB11Q9NX14 153 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 PUS1Q9Y606 427 aaKnown RBP eCLIP10.04□□□□□ -0.8
EBF3-202ENST00000368648 A0A087WUU8 490 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 LDB3O75112 727 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 MPC1LP0DKB6 136 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 MAGEB1P43366 347 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 VASPP50552 380 aaPredicted RBP10.04□□□□□ -0.8
EBF3-202ENST00000368648 CLDN20P56880 219 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 UBE2IP63279 158 aaKnown RBP10.04□□□□□ -0.8
EBF3-202ENST00000368648 TEKQ02763 1124 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 OR7A5Q15622 319 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 LTB4RQ15722 352 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 C3orf38Q5JPI3 329 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 TMUB2Q71RG4 321 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 OR8D4Q8NGM9 314 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 OR2AJ1Q8NGZ0 328 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 WFDC5Q8TCV5 224 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 ACOT11Q8WXI4 607 aaPredicted RBP10.04□□□□□ -0.8
EBF3-202ENST00000368648 ZBTB8AQ96BR9 441 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 RETREG1Q9H6L5 497 aa10.04□□□□□ -0.8
EBF3-202ENST00000368648 ZAR1LA6NP61 321 aa10.03□□□□□ -0.8
EBF3-202ENST00000368648 LILRB3O75022 631 aa10.03□□□□□ -0.8
EBF3-202ENST00000368648 CXCL10P02778 98 aa10.03□□□□□ -0.8
EBF3-202ENST00000368648 ZNF28P17035 718 aa10.03□□□□□ -0.8
EBF3-202ENST00000368648 IGFALSP35858 605 aa10.03□□□□□ -0.8
EBF3-202ENST00000368648 XCR1P46094 333 aa10.03□□□□□ -0.8
EBF3-202ENST00000368648 HNRNPKP61978 463 aaKnown RBP eCLIP10.03□□□□□ -0.8
EBF3-202ENST00000368648 S100A12P80511 92 aa10.03□□□□□ -0.8
EBF3-202ENST00000368648 LSM11P83369 360 aaKnown RBP eCLIP10.03□□□□□ -0.8
EBF3-202ENST00000368648 SPOCK1Q08629 439 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms