RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 OR5M10Q6IEU7 315 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 OAFQ86UD1 273 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 FADS6Q8N9I5 356 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 OR8D4Q8NGM9 314 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 RHOXF1Q8NHV9 184 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 TRUB1Q8WWH5 349 aaKnown RBP12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 SAMD8Q96LT4 415 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 FRMD6Q96NE9 622 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 NDEL1Q9GZM8 345 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 SACM1LQ9NTJ5 587 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 CLN6Q9NWW5 311 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 TUBA8Q9NY65 449 aaPredicted RBP12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 ZNF226Q9NYT6 803 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 SIGLEC7Q9Y286 467 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 TMED7Q9Y3B3 224 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 TPRKBQ9Y3C4 175 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 CDK2AP1O14519 115 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 WBP4O75554 376 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 SNX4O95219 450 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 CH25HO95992 272 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 PRKAR1AP10644 381 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 GABRB1P18505 474 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 CCNA2P20248 432 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 SLC6A6P31641 620 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 APOBEC1P41238 236 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 MASP1P48740 699 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 CYB561P49447 251 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 PCYT1AP49585 367 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 ST13P50502 369 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 SNRPGP62308 76 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 OC90Q02509 493 aaPredicted RBP12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 PLPPR5Q32ZL2 321 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 LAIR2Q6ISS4 152 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 POMZP3Q6PJE2 187 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 SMARCD3Q6STE5 483 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 PLCZ1Q86YW0 608 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 C10orf53Q8N6V4 93 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 BPIFB6Q8NFQ5 453 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 OR2T33Q8NG76 320 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 OR8J1Q8NGP2 316 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 STK35Q8TDR2 534 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 APH1BQ8WW43 257 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 ZNF524Q96C55 264 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 TMEM41AQ96HV5 264 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 MRGPRX4Q96LA9 322 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 POLDIP3Q9BY77 421 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 MED17Q9NVC6 651 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 TVP23BQ9NYZ1 205 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 BAIAP2Q9UQB8 552 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 VDAC3Q9Y277 283 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 ZNF337Q9Y3M9 751 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 NOTCH2Q04721 2471 aa12.55□□□□□ -0.4
PDLIM5-203ENST00000359265 TRAV36DV7A0A075B6V5 113 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 TRAV27A0A087WT01 109 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 A0A087WZY1 265 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 TMEM72A0PK05 275 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 SH3D21A4FU49 640 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 ARGFXA6NJG6 315 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 A8MVM7 634 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 M0R129 80 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 ETV2O00321 342 aaPredicted RBP12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 NKX2-8O15522 239 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 NDUFB2O95178 105 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 AHSA1O95433 338 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 CLPTM1O96005 669 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 HMGN1P05114 100 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 ATP6V1B1P15313 513 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 FUT1P19526 365 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 GRK5P34947 590 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 CDH15P55291 814 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 SOX8P57073 446 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 TUBA4AP68366 448 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 EGR4Q05215 589 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 FOXF1Q12946 379 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 SRSF6Q13247 344 aaKnown RBP12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 SNAPC1Q16533 368 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 ZNF74Q16587 644 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 ANKDD1AQ495B1 522 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 C4orf17Q53FE4 359 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 SLC25A53Q5H9E4 307 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 CLEC12AQ5QGZ9 265 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 TMEM201Q5SNT2 666 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 ATP1A1-AS1Q5TC04 95 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 ZNF468Q5VIY5 522 aaPredicted RBP12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 ACSM5Q6NUN0 579 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 ARSKQ6UWY0 536 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 SLC46A3Q7Z3Q1 461 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 ADGRG3Q86Y34 549 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 CCDC103Q8IW40 242 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 GALNT16Q8N428 558 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 TCEANCQ8N8B7 351 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 OR1J4Q8NGS1 313 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 OR4Q3Q8NH05 313 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 LIPHQ8WWY8 451 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 UBE2FQ969M7 185 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 NTNG2Q96CW9 530 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 DTNBP1Q96EV8 351 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 PLEKHA8Q96JA3 519 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 Q96MT0 163 aa12.54□□□□□ -0.4
PDLIM5-203ENST00000359265 IL4I1Q96RQ9 567 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms