RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 ADRB1P08588 477 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 TFPIP10646 304 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 HIST1H1CP16403 213 aaKnown RBP6.07□□□□□ -1.44
CSDE1-203ENST00000358528 NFYAP23511 347 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-203ENST00000358528 MAP2K6P52564 334 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 FBXW4P57775 412 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 TRA2BP62995 288 aaKnown RBP6.07□□□□□ -1.44
CSDE1-203ENST00000358528 SORDQ00796 357 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 CST6Q15828 149 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 NKPD1Q17RQ9 610 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 GSG1Q2KHT4 349 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 CD300LDQ6UXZ3 194 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 SLC39A5Q6ZMH5 540 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 C17orf107Q6ZR85 190 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 NDUFAF7Q7L592 441 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 COMMD2Q86X83 199 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 ARIH2OSQ8N7S6 290 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 FAM181AQ8N9Y4 354 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 ST8SIA2Q92186 375 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 SMARCD2Q92925 531 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 COMMD4Q9H0A8 199 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 ZBP1Q9H171 429 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 PPA2Q9H2U2 334 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 HRASLSQ9HDD0 168 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 WASH6PQ9NQA3 447 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 ABRACLQ9P1F3 81 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 LAMP5Q9UJQ1 280 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 NOP16Q9Y3C1 178 aaKnown RBP6.07□□□□□ -1.44
CSDE1-203ENST00000358528 V9GY05 133 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 TRPM7Q96QT4 1865 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 TCRBV16S1A1N1A0A5B0 115 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 LILRB5O75023 590 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 VAMP1P23763 118 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 RPL35P42766 123 aaKnown RBP6.07□□□□□ -1.44
CSDE1-203ENST00000358528 CCR9P51686 369 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 SKP1P63208 163 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 PUDPQ08623 228 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 SRSF5Q13243 272 aaKnown RBP6.07□□□□□ -1.44
CSDE1-203ENST00000358528 MLF2Q15773 248 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-203ENST00000358528 ZNF77Q15935 545 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 KIAA0907Q7Z7F0 614 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-203ENST00000358528 PHOSPHO1Q8TCT1 267 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 DUSP19Q8WTR2 217 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 ST8SIA4Q92187 359 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 SGTBQ96EQ0 304 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 GAL3ST4Q96RP7 486 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 ARHGDIGQ99819 225 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 ATG5Q9H1Y0 275 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 ZFP64Q9NPA5 681 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 CMC2Q9NRP2 79 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 CAMK2AQ9UQM7 478 aa6.07□□□□□ -1.44
CSDE1-203ENST00000358528 A0A1B0GTH9 108 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 TEX51A0A1B0GUA7 166 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 H3BUI4 141 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 IMPA2O14732 288 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 NDUFB2O95178 105 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 KAT7O95251 611 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 ECDO95905 644 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-203ENST00000358528 ACSM4P0C7M7 580 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 SRMP19623 302 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 POU3F2P20265 443 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-203ENST00000358528 PTBP1P26599 531 aaKnown RBP eCLIP6.06□□□□□ -1.444e-9■■■■■ 37.3
CSDE1-203ENST00000358528 NUDT1P36639 197 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 LIMK1P53667 647 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 ACTA2P62736 377 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 ACTG2P63267 376 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 TMEM64Q6YI46 380 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 KCTD9Q7L273 389 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 PDZD9Q8IXQ8 264 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 SAMD14Q8IZD0 417 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-203ENST00000358528 JAGN1Q8N5M9 183 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 IL17RCQ8NAC3 791 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 OR52R1Q8NGF1 315 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 ASB12Q8WXK4 309 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 LINC00052Q96N35 136 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 KXD1Q9BQD3 176 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 C1QTNF7Q9BXJ2 289 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 MFFQ9GZY8 342 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 GHITMQ9H3K2 345 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 ERVMER34-1Q9H9K5 563 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 RXFP3Q9NSD7 469 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 ING1Q9UK53 422 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-203ENST00000358528 hCG_1807616A0A1W2PRN6 198 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 FKTNO75072 461 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 DNAJB6O75190 326 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 FGF19O95750 216 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 ZGLP1P0C6A0 271 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 ITGB8P26012 769 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 CCKBRP32239 447 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 MAP3K8P41279 467 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 AKR1C2P52895 323 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 CTXN1P60606 82 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 TAGLNQ01995 201 aaKnown RBP6.06□□□□□ -1.44
CSDE1-203ENST00000358528 AKR1C1Q04828 323 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 RPE65Q16518 533 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 LINC00303Q3SY05 128 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 FAM74A1Q5RGS3 127 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 OLFML2AQ68BL7 652 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 WDR88Q6ZMY6 472 aa6.06□□□□□ -1.44
CSDE1-203ENST00000358528 BPHLQ86WA6 291 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms