RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PHYHIPQ92561 330 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 ZNF681Q96N22 645 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 ATOH8Q96SQ7 321 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 GABARAPL1Q9H0R8 117 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 OR52D1Q9H346 318 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 ISYNA1Q9NPH2 558 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 USP54Q70EL1 1684 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 LRIT2A6NDA9 550 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 UMAD1C9J7I0 102 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 VEGFDO43915 354 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 NME2P22392 152 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 HTR1FP30939 366 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 CTXN1P60606 82 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 CDH26Q8IXH8 852 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 SH3RF2Q8TEC5 729 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 KHSRPQ92945 711 aaKnown RBP eCLIP8.2□□□□□ -1.1
COL6A6-201ENST00000358511 ZNF583Q96ND8 569 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 MVB12BQ9H7P6 319 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 FBRSQ9HAH7 460 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 C12orf10Q9HB07 376 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 CNOT4O95628 575 aaKnown RBP8.2□□□□□ -1.1
COL6A6-201ENST00000358511 NFYBP25208 207 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 CHRNEQ04844 493 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 HYAL2Q12891 473 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 COL13A1Q5TAT6 717 aaPredicted RBP8.2□□□□□ -1.1
COL6A6-201ENST00000358511 KLHDC8BQ8IXV7 354 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 PTCHD1Q96NR3 888 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 TLR9Q9NR96 1032 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 USP36Q9P275 1121 aaKnown RBP8.2□□□□□ -1.1
COL6A6-201ENST00000358511 SPTBN1Q01082 2364 aaKnown RBP8.2□□□□□ -1.1
COL6A6-201ENST00000358511 TMEM129A0AVI4 362 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 TRAPPC6AO75865 159 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 NSA2O95478 260 aaKnown RBP8.2□□□□□ -1.1
COL6A6-201ENST00000358511 F10P00742 488 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 UBL4AP11441 157 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 PITX1P78337 314 aaPredicted RBP8.2□□□□□ -1.1
COL6A6-201ENST00000358511 DEFB134Q4QY38 66 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 TRAPPC6BQ86SZ2 158 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 BPHLQ86WA6 291 aaPredicted RBP8.2□□□□□ -1.1
COL6A6-201ENST00000358511 LIX1LQ8IVB5 337 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 LSMEM2Q8N112 164 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 PGAP3Q96FM1 320 aaPredicted RBP8.2□□□□□ -1.1
COL6A6-201ENST00000358511 BMFQ96LC9 184 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 B4GALT6Q9UBX8 382 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 GJD2Q9UKL4 321 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 EPHA1P21709 976 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 POLR2IP36954 125 aaKnown RBP8.2□□□□□ -1.1
COL6A6-201ENST00000358511 MC3RP41968 323 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 ECI1P42126 302 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 ZNF140P52738 457 aaPredicted RBP8.2□□□□□ -1.1
COL6A6-201ENST00000358511 RAB6CQ53S08 254 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 PM20D1Q6GTS8 502 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 Q6ZPB1 254 aaPredicted RBP8.2□□□□□ -1.1
COL6A6-201ENST00000358511 NAA40Q86UY6 237 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 BAGE3Q86Y29 109 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 BAGE2Q86Y30 109 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 SPTSSAQ969W0 71 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 LRFN5Q96NI6 719 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 NECTIN4Q96NY8 510 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 RAB6CQ9H0N0 254 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 RNF39Q9H2S5 420 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 SCPEP1Q9HB40 452 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 GKN1Q9NS71 199 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 GMPR2Q9P2T1 348 aaKnown RBP8.2□□□□□ -1.1
COL6A6-201ENST00000358511 NDRG4Q9ULP0 352 aaKnown RBP8.2□□□□□ -1.1
COL6A6-201ENST00000358511 KIAA1551Q9HCM1 1747 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 HOXB5P09067 269 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 IL1RNP18510 177 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 CRABP1P29762 137 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 PSMB10P40306 273 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 GZMKP49863 264 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 CTU2Q2VPK5 515 aaKnown RBP8.2□□□□□ -1.1
COL6A6-201ENST00000358511 CCDC74AQ96AQ1 378 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 LRIG1Q96JA1 1093 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 HHIPL1Q96JK4 782 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 EVA1AQ9H8M9 152 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 ZNF629Q9UEG4 869 aaPredicted RBP8.2□□□□□ -1.1
COL6A6-201ENST00000358511 MSTNO14793 375 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 TXNDC12O95881 172 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 LPLP06858 475 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 SRMP19623 302 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 OR2B8PP59922 312 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 SLC9A3R2Q15599 337 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 FAM180BQ6P0A1 224 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 FIGNL1Q6PIW4 674 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 PRSS42Q7Z5A4 293 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 HPSE2Q8WWQ2 592 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 CCDC74BQ96LY2 380 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 OR8D2Q9GZM6 311 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 GAR1Q9NY12 217 aaKnown RBP8.2□□□□□ -1.1
COL6A6-201ENST00000358511 FAM183AA6NL82 134 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 C8AP07357 584 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 COTL1Q14019 142 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 NXNL2Q5VZ03 156 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 MAMDC4Q6UXC1 1216 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 RRAGCQ9HB90 399 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 DKKL1Q9UK85 242 aa8.2□□□□□ -1.1
COL6A6-201ENST00000358511 A0A0G2JLL6 359 aaPredicted RBP8.19□□□□□ -1.1
COL6A6-201ENST00000358511 AKR7A2O43488 359 aa8.19□□□□□ -1.1
COL6A6-201ENST00000358511 ELAVL4P26378 380 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms