RNA–Protein interactions for RNA: ENST00000355231.9

HMBOX1-202, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-202ENST00000355231 ZNF282Q9UDV7 671 aaPredicted RBP4.5□□□□□ -1.69
HMBOX1-202ENST00000355231 SAMD4AQ9UPU9 718 aaKnown RBP4.5□□□□□ -1.69
HMBOX1-202ENST00000355231 ZFP30Q9Y2G7 519 aa4.5□□□□□ -1.69
HMBOX1-202ENST00000355231 GSTK1Q9Y2Q3 226 aa4.5□□□□□ -1.69
HMBOX1-202ENST00000355231 MRPS2Q9Y399 296 aaKnown RBP4.5□□□□□ -1.69
HMBOX1-202ENST00000355231 ADAM18Q9Y3Q7 739 aa4.5□□□□□ -1.69
HMBOX1-202ENST00000355231 PLEKHM1Q9Y4G2 1056 aa4.5□□□□□ -1.69
HMBOX1-202ENST00000355231 HS3ST4Q9Y661 456 aa4.5□□□□□ -1.69
HMBOX1-202ENST00000355231 POMT1Q9Y6A1 747 aa4.5□□□□□ -1.69
HMBOX1-202ENST00000355231 NYNRINQ9P2P1 1898 aaKnown RBP4.5□□□□□ -1.69
HMBOX1-202ENST00000355231 MTCL1Q9Y4B5 1905 aaKnown RBP4.5□□□□□ -1.69
HMBOX1-202ENST00000355231 DOCK4Q8N1I0 1966 aa4.5□□□□□ -1.69
HMBOX1-202ENST00000355231 GREB1Q4ZG55 1949 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 SHROOM3Q8TF72 1996 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 SMCO3A2RU48 225 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 RPL36A-HNRNPH2H7BZ11 118 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 SDHDO14521 159 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 PPP1R2P9O14990 202 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 CTAG2O75638 210 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 FGF19O95750 216 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 GCGP01275 180 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 HIST1H2ABP04908 130 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 HLA-DQB2P05538 268 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 NBEAP1P0C6P0 100 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 OR2T7P0C7T2 308 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 CD8BP10966 210 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 RPA2P15927 270 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 GABRB1P18505 474 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 TBPP20226 339 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 RAB5AP20339 215 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 OR3A1P47881 315 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 MRPL19P49406 292 aaKnown RBP4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 DGKGP49619 791 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 GSK3BP49841 420 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 MECP2P51608 486 aaKnown RBP4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 CTBP2P56545 445 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 VSX2P58304 361 aaPredicted RBP4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 LSM6P62312 80 aaKnown RBP4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 HSF1Q00613 529 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 EGR3Q06889 387 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 SRSF5Q13243 272 aaKnown RBP4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 MRPL49Q13405 166 aaKnown RBP4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 GTF2H2Q13888 395 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 C1DQ13901 141 aaKnown RBP4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 GAMTQ14353 236 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 VMACQ2NL98 169 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 EML3Q32P44 896 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 CTXN3Q4LDR2 81 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 ZNF628Q5EBL2 1059 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 ARSJQ5FYB0 599 aaPredicted RBP4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 MS4A13Q5J8X5 152 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 EXOSC6Q5RKV6 272 aaKnown RBP4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 NKAIN2Q5VXU1 208 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 KIAA0930Q6ICG6 404 aaPredicted RBP4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 OR52W1Q6IF63 320 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 GTF2H2CQ6P1K8 395 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 TBPL2Q6SJ96 375 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 PET117Q6UWS5 81 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 CES3Q6UWW8 571 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 PRSS57Q6UWY2 283 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 BTNL3Q6UXE8 466 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 HIST3H2AQ7L7L0 130 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 GRINAQ7Z429 371 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 WDR53Q7Z5U6 358 aaPredicted RBP4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 TECPR1Q7Z6L1 1165 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 LHFPL4Q7Z7J7 247 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 KCNMB4Q86W47 210 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 THNSL2Q86YJ6 484 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 FOXRED2Q8IWF2 684 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 CMIPQ8IY22 773 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 TTC9BQ8N6N2 239 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 DCBLD1Q8N8Z6 715 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 GPR26Q8NDV2 337 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 OR5L2Q8NGL0 311 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 OR1J4Q8NGS1 313 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 OR8U1Q8NH10 309 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 CNIH3Q8TBE1 160 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 RNASEH2CQ8TDP1 164 aaKnown RBP4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 ADAMTS18Q8TE60 1221 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 C2orf15Q8WU43 125 aaKnown RBP4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 HIST1H2ACQ93077 130 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 HIST1H2BAQ96A08 127 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 LRRC58Q96CX6 371 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 MFSD3Q96ES6 412 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 C14orf79Q96F83 325 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 SMIM8Q96KF7 97 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 CCDC115Q96NT0 180 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 PGLYRP2Q96PD5 576 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 CDK15Q96Q40 435 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 OR2M4Q96R27 311 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 CNN2Q99439 309 aaKnown RBP4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 GPR22Q99680 433 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 TBL1YQ9BQ87 522 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 URM1Q9BTM9 101 aaKnown RBP4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 GATA5Q9BWX5 397 aaPredicted RBP4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 JAM3Q9BX67 310 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 C1QTNF3Q9BXJ4 246 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 KLF16Q9BXK1 252 aaPredicted RBP4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 LRRC3Q9BY71 257 aa4.49□□□□□ -1.69
HMBOX1-202ENST00000355231 ACTR3CQ9C0K3 210 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms