RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 LINGO3P0C6S8 592 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 PEPDP12955 493 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 ZNF708P17019 499 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 ZNF23P17027 643 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 PTNP21246 168 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 CHMP24386 653 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 ACAA2P42765 397 aaKnown RBP12.41□□□□□ -0.42
TPM4-202ENST00000344824 P2RX1P51575 399 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 CLDN18P56856 261 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 B3GALT5-AS1P59052 145 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 LAPTM4AQ15012 233 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 OR1Q1Q15612 314 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 SNCBQ16143 134 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 LPCAT4Q643R3 524 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 LIX1LQ8IVB5 337 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 MCEMP1Q8IX19 187 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 C9orf106Q8NAJ2 232 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 TOR1AIP2Q8NFQ8 470 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 ZNF563Q8TA94 476 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 ADAMTS16Q8TE57 1224 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 CENPNQ96H22 339 aaPredicted RBP12.41□□□□□ -0.42
TPM4-202ENST00000344824 BDH2Q9BUT1 245 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 TMEM185BQ9H7F4 350 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 EVA1AQ9H8M9 152 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 TMEM27Q9HBJ8 222 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 EXOSC3Q9NQT5 275 aaKnown RBP12.41□□□□□ -0.42
TPM4-202ENST00000344824 RPS6KB2Q9UBS0 482 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 MRPS18CQ9Y3D5 142 aaKnown RBP12.41□□□□□ -0.42
TPM4-202ENST00000344824 ZNF337Q9Y3M9 751 aa12.41□□□□□ -0.42
TPM4-202ENST00000344824 IGLV3-32A0A0A0MS00 114 aa12.4□□□□□ -0.42
TPM4-202ENST00000344824 H0YC42 278 aa12.4□□□□□ -0.42
TPM4-202ENST00000344824 NTN1O95631 604 aa12.4□□□□□ -0.42
TPM4-202ENST00000344824 OPN1LWP04000 364 aa12.4□□□□□ -0.42
TPM4-202ENST00000344824 H1F0P07305 194 aaKnown RBP12.4□□□□□ -0.42
TPM4-202ENST00000344824 TMIGD3P0DMS9 266 aaPredicted RBP12.4□□□□□ -0.42
TPM4-202ENST00000344824 CPN1P15169 458 aa12.4□□□□□ -0.42
TPM4-202ENST00000344824 PEX2P28328 305 aa12.4□□□□□ -0.42
TPM4-202ENST00000344824 IFNA8P32881 189 aa12.4□□□□□ -0.42
TPM4-202ENST00000344824 IDH2P48735 452 aaKnown RBP12.4□□□□□ -0.42
TPM4-202ENST00000344824 TPD52P55327 224 aaPredicted RBP12.4□□□□□ -0.42
TPM4-202ENST00000344824 COPZ1P61923 177 aa12.4□□□□□ -0.42
TPM4-202ENST00000344824 CBFBQ13951 182 aa12.4□□□□□ -0.42
TPM4-202ENST00000344824 SLC25A35Q3KQZ1 300 aa12.4□□□□□ -0.42
TPM4-202ENST00000344824 TMEM179BQ7Z7N9 219 aa12.4□□□□□ -0.42
TPM4-202ENST00000344824 HS3ST5Q8IZT8 346 aa12.4□□□□□ -0.42
TPM4-202ENST00000344824 GCNT2Q8N0V5 402 aa12.4□□□□□ -0.42
TPM4-202ENST00000344824 OR5W2Q8NH69 310 aa12.4□□□□□ -0.42
TPM4-202ENST00000344824 ZPLD1Q8TCW7 415 aa12.4□□□□□ -0.42
TPM4-202ENST00000344824 SLC41A3Q96GZ6 507 aa12.4□□□□□ -0.42
TPM4-202ENST00000344824 CIB1Q99828 191 aa12.4□□□□□ -0.42
TPM4-202ENST00000344824 NMNAT1Q9HAN9 279 aaPredicted RBP12.4□□□□□ -0.42
TPM4-202ENST00000344824 NTN4Q9HB63 628 aa12.4□□□□□ -0.42
TPM4-202ENST00000344824 HHATLQ9HCP6 504 aa12.4□□□□□ -0.42
TPM4-202ENST00000344824 MED17Q9NVC6 651 aa12.4□□□□□ -0.42
TPM4-202ENST00000344824 SLC7A7Q9UM01 511 aa12.4□□□□□ -0.42
TPM4-202ENST00000344824 OAZ3Q9UMX2 235 aa12.4□□□□□ -0.42
TPM4-202ENST00000344824 ANKHD1Q8IWZ3 2542 aaKnown RBP12.4□□□□□ -0.42
TPM4-202ENST00000344824 A0A1B0GWA3 101 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 TRAPPC13A5PLN9 417 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 MBD3L4A6NDZ8 208 aaPredicted RBP12.39□□□□□ -0.43
TPM4-202ENST00000344824 MBD3L3A6NE82 208 aaPredicted RBP12.39□□□□□ -0.43
TPM4-202ENST00000344824 MBD3L5A6NJ08 208 aaPredicted RBP12.39□□□□□ -0.43
TPM4-202ENST00000344824 CD8B2A6NJW9 211 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 PDLIM1O00151 329 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 EIF1AYO14602 144 aaKnown RBP12.39□□□□□ -0.43
TPM4-202ENST00000344824 PRSS23O95084 383 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 UQCRBP14927 111 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 PGCP20142 388 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 MSX1P28360 303 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 UQCRC1P31930 480 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 TIMP3P35625 211 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 SLC6A8P48029 635 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 CLDN20P56880 219 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 FOXF1Q12946 379 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 SNTB1Q13884 538 aaKnown RBP12.39□□□□□ -0.43
TPM4-202ENST00000344824 TOMM34Q15785 309 aaPredicted RBP12.39□□□□□ -0.43
TPM4-202ENST00000344824 EXOC3L2Q2M3D2 409 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 POMZP3Q6PJE2 187 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 GDF7Q7Z4P5 450 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 RELL2Q8NC24 303 aaPredicted RBP12.39□□□□□ -0.43
TPM4-202ENST00000344824 MBD3L2Q8NHZ7 208 aaPredicted RBP12.39□□□□□ -0.43
TPM4-202ENST00000344824 SLC35B4Q969S0 331 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 INTS12Q96CB8 462 aaKnown RBP12.39□□□□□ -0.43
TPM4-202ENST00000344824 NPAS1Q99742 590 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 TRIM2Q9C040 744 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 CALHM2Q9HA72 323 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 NPDC1Q9NQX5 325 aaPredicted RBP12.39□□□□□ -0.43
TPM4-202ENST00000344824 SELENONQ9NZV5 590 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 STOML1Q9UBI4 398 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 ICAM5Q9UMF0 924 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 MAGED1Q9Y5V3 778 aaPredicted RBP12.39□□□□□ -0.43
TPM4-202ENST00000344824 LYVE1Q9Y5Y7 322 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 DCHS2Q6V1P9 2916 aa12.39□□□□□ -0.43
TPM4-202ENST00000344824 A0A087WZY1 265 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 TRBV4-1A0A0J9YWV2 114 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 FMO6PO60774 539 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 OR5F1O95221 314 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 THY1P04216 161 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 PRF1P14222 555 aa12.38□□□□□ -0.43
TPM4-202ENST00000344824 ZNF17P17021 662 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms