RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 EAF2Q96CJ1 260 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 SENP8Q96LD8 212 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF582Q96NG8 517 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 URM1Q9BTM9 101 aaKnown RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 PLEKHA2Q9HB19 425 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 RIMS1Q86UR5 1692 aaKnown RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 PMS2P2O95744 297 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 GJA4P35212 333 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 THBS4P35443 961 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 NXPE4Q6UWF7 544 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 LCLAT1Q6UWP7 414 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 C4orf32Q8N8J7 132 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 OR2T33Q8NG76 320 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 OR4K5Q8NGD3 323 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 EID2BQ96D98 161 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 FAM193BQ96PV7 902 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 SUSD2Q9UGT4 822 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 ERVH48-1M5A8F1 160 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 OR7C2O60412 319 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 RECQL4O94761 1208 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 OC90Q02509 493 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 KDM4DQ6B0I6 523 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 C19orf48Q6RUI8 117 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 APOOLQ6UXV4 268 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 POC1AQ8NBT0 407 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 OR4N2Q8NGD1 307 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 FNDC9Q8TBE3 224 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 HRASLS5Q96KN8 279 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 PLA2G12BQ9BX93 195 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 J3QR06 171 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 SCG5P05408 212 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 SV2AQ7L0J3 742 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 ATP6V0BQ99437 205 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 HES4Q9HCC6 221 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 FZD3Q9NPG1 666 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 SIRT3Q9NTG7 399 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-202ENST00000344113 HSPB7Q9UBY9 170 aa3.53□□□□□ -1.84
SYNE2-202ENST00000344113 VSTM2BA6NLU5 285 aa3.53□□□□□ -1.85
SYNE2-202ENST00000344113 VSTM5A8MXK1 200 aa3.53□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF736B4DX44 427 aaPredicted RBP3.53□□□□□ -1.85
SYNE2-202ENST00000344113 GABRA5P31644 462 aa3.53□□□□□ -1.85
SYNE2-202ENST00000344113 NPRL3Q12980 569 aa3.53□□□□□ -1.85
SYNE2-202ENST00000344113 IAH1Q2TAA2 248 aaPredicted RBP3.53□□□□□ -1.85
SYNE2-202ENST00000344113 TMEM249Q2WGJ8 235 aa3.53□□□□□ -1.85
SYNE2-202ENST00000344113 NRSN1Q8IZ57 195 aa3.53□□□□□ -1.85
SYNE2-202ENST00000344113 ST8SIA2Q92186 375 aa3.53□□□□□ -1.85
SYNE2-202ENST00000344113 EXOSC3Q9NQT5 275 aaKnown RBP3.53□□□□□ -1.85
SYNE2-202ENST00000344113 P2RX2Q9UBL9 471 aa3.53□□□□□ -1.85
SYNE2-202ENST00000344113 ADGBQ8N7X0 1667 aa3.53□□□□□ -1.85
SYNE2-202ENST00000344113 CDC42BPBQ9Y5S2 1711 aa3.53□□□□□ -1.85
SYNE2-202ENST00000344113 GREM1O60565 184 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 ITGA5P08648 1049 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 RHCEP18577 417 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 SERPINA2P20848 420 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 CCR10P46092 362 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 PDX1P52945 283 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 SHBQ15464 509 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 PMCHL1Q16048 86 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 OR10H4Q8NGA5 316 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 OR5A1Q8NGJ0 315 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 OR51G2Q8NGK0 314 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 ACPTQ9BZG2 426 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 RCCD1A6NED2 376 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF749O43361 778 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 ADH1BP00325 375 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 DND1Q8IYX4 353 aaKnown RBP3.52□□□□□ -1.85
SYNE2-202ENST00000344113 MMP21Q8N119 569 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 OR14L1PQ8NHC6 308 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 IL22RA2Q969J5 263 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 GPR62Q9BZJ7 368 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 GHITMQ9H3K2 345 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 PLSCR5A0PG75 271 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 A6NCN8 305 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 F5H5K5 113 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 M0R2N6 131 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF28P17035 718 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 HOXA13P31271 388 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-202ENST00000344113 MGAT3Q09327 533 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 PNKDQ8N490 385 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF337Q9Y3M9 751 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 CHST2Q9Y4C5 530 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 COL6A6A6NMZ7 2263 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 H7BYZ3 331 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 ITPKBP27987 946 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 KRTDAPP60985 99 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 BAXQ07812 192 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 C9orf62Q8N4C0 152 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 DYRK2Q92630 601 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 ZBED6CLQ96FA7 236 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-202ENST00000344113 NECTIN4Q96NY8 510 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 NELL2Q99435 816 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 FBXO34Q9NWN3 711 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 NAT8BQ9UHF3 227 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 SALL4Q9UJQ4 1053 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 C9JVG2 144 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 CBX4O00257 560 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 ENSAO43768 121 aaKnown RBP3.52□□□□□ -1.85
SYNE2-202ENST00000344113 NDUFB10O96000 172 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 SMIM17P0DL12 118 aa3.52□□□□□ -1.85
SYNE2-202ENST00000344113 MMP11P24347 488 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms