RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 FRKP42685 505 aaPredicted RBP11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 MVDP53602 400 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 POU4F2Q12837 409 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 C12orf73Q69YU5 71 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 ZNF584Q8IVC4 421 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 OR52N1Q8NH53 320 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 Q96M85 177 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 FGF22Q9HCT0 170 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 ASXL3Q9C0F0 2248 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 E9PI62 339 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 UBL3O95164 117 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 MYOGP15173 224 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 TMIEQ8NEW7 156 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 OR51D1Q8NGF3 324 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 OR2A1Q8NGT9 310 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 SFXN2Q96NB2 322 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 SDF2Q99470 211 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 KLK11Q9UBX7 282 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 SPTA1P02549 2419 aa11.51□□□□□ -0.57
SNRNP48-201ENST00000342415 SVILO95425 2214 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 POM121BA6NF01 834 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 RGS11O94810 467 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 RAB3DO95716 219 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 RNH1P13489 461 aaKnown RBP11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 F3P13726 295 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 C5AR1P21730 350 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 LSSP48449 732 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 HMGA2P52926 109 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 PCBP3P57721 371 aaKnown RBP11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 GALK2Q01415 458 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 CDKN3Q16667 212 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 TANGO2Q6ICL3 276 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 ORAI3Q9BRQ5 295 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 POTEKPQ9BYX7 375 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 ZBP1Q9H171 429 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 ING1Q9UK53 422 aaPredicted RBP11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 ZNF878C9JN71 531 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 SURF4O15260 269 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 RLN2P04090 185 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 SFTPBP07988 381 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 ZNF20P17024 532 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 GJA4P35212 333 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 OPRD1P41143 372 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 SPOCK1Q08629 439 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 TCTN1Q2MV58 587 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 HAGHLQ6PII5 290 aaPredicted RBP11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 SPAG16Q8N0X2 631 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 SERINC2Q96SA4 455 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 TSPAN10Q9H1Z9 355 aaPredicted RBP11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 C20orf141Q9NUB4 165 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 ASB6Q9NWX5 421 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 REV1Q9UBZ9 1251 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 APOBEC3BQ9UH17 382 aaKnown RBP11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 PPM1BO75688 479 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 AHSA1O95433 338 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 GPR75O95800 540 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 HCKP08631 526 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 TRA2BP62995 288 aaKnown RBP11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 C1orf189Q5VU69 101 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 GLT8D1Q68CQ7 371 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 NEK7Q8TDX7 302 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 CHAC2Q8WUX2 184 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 ADAMTS14Q8WXS8 1223 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 BTBD2Q9BX70 525 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 C1QTNF6Q9BXI9 259 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 EPHA6Q9UF33 1036 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 CYP8B1Q9UNU6 501 aa11.5□□□□□ -0.57
SNRNP48-201ENST00000342415 F5H5P2 479 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 ACOT7O00154 380 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 FARS2O95363 451 aaKnown RBP11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 DCNP07585 359 aaKnown RBP11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 GP1BBP13224 206 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 AKR1C2P52895 323 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 AKR1C1Q04828 323 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 SMCO1Q147U7 214 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 CARD17Q5XLA6 110 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 CCSAPQ6IQ19 270 aaPredicted RBP11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 TPRA1Q86W33 373 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 OR2T4Q8NH00 348 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 GOT1L1Q8NHS2 421 aaPredicted RBP11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 NPRL2Q8WTW4 380 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 C20orf85Q9H1P6 137 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 TBC1D29Q9UFV1 150 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 ANK1P16157 1881 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 LGALS8O00214 317 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 CDC42EP2O14613 210 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 SDC3O75056 442 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 SC5DO75845 299 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 ITGA5P08648 1049 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 HIST1H1CP16403 213 aaKnown RBP11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 PRKACAP17612 351 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 PXNP49023 591 aaPredicted RBP11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 CLDN20P56880 219 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 NRG3P56975 720 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 HHEXQ03014 270 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 LTBQ06643 244 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 EXOSC2Q13868 293 aaKnown RBP11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 RNASE10Q5GAN6 216 aaKnown RBP11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 HEPHL1Q6MZM0 1159 aa11.49□□□□□ -0.57
SNRNP48-201ENST00000342415 ARSKQ6UWY0 536 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms