RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 PGLYRP3Q96LB9 341 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 FLRT3Q9NZU0 649 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 IKZF2Q9UKS7 526 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 MAS1P04201 325 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 NGFRP08138 427 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 UCHL1P09936 223 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 RAD52P43351 418 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 RPS21P63220 83 aaKnown RBP13.26□□□□□ -0.29
CPSF7-201ENST00000340437 GSG1Q2KHT4 349 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 SLC35F2Q8IXU6 374 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 PRSS58Q8IYP2 241 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 OR51Q1Q8NH59 317 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 NXPE2Q96DL1 559 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 OR2M4Q96R27 311 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 RPP25Q9BUL9 199 aaKnown RBP13.26□□□□□ -0.29
CPSF7-201ENST00000340437 LMAN2LQ9H0V9 348 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 ZNF223Q9UK11 482 aaPredicted RBP13.26□□□□□ -0.29
CPSF7-201ENST00000340437 FKBP7Q9Y680 259 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 PRSS38A1L453 326 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 H0YGG7 62 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 M0R233 179 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 RDH16O75452 317 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 UBL3O95164 117 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 HNRNPA1P09651 372 aaKnown RBP eCLIP13.26□□□□□ -0.29
CPSF7-201ENST00000340437 IGFBP4P22692 258 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 SLC6A6P31641 620 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 ARF3P61204 181 aaPredicted RBP13.26□□□□□ -0.29
CPSF7-201ENST00000340437 PITPNAQ00169 270 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 ACSM1Q08AH1 577 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 ZMYND11Q15326 602 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 PRAMEF8Q5VWM4 474 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 PRAMEF7Q5VXH5 474 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 HEPHL1Q6MZM0 1159 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 DGAT2L6Q6ZPD8 337 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 PLA2G2FQ9BZM2 168 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 C20orf85Q9H1P6 137 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 OR10H1Q9Y4A9 318 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 NCOR1O75376 2440 aa13.26□□□□□ -0.29
CPSF7-201ENST00000340437 TVP23AA6NH52 213 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 HRKO00198 91 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 ARL6IP5O75915 188 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 APODP05090 189 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 ATF4P18848 351 aaPredicted RBP13.25□□□□□ -0.29
CPSF7-201ENST00000340437 PTBP1P26599 531 aaKnown RBP eCLIP13.25□□□□□ -0.29
CPSF7-201ENST00000340437 RPS15AP62244 130 aaKnown RBP13.25□□□□□ -0.29
CPSF7-201ENST00000340437 OR2L13Q8N349 312 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 MS4A15Q8N5U1 240 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 AHCYL2Q96HN2 611 aaKnown RBP13.25□□□□□ -0.29
CPSF7-201ENST00000340437 GINS4Q9BRT9 223 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 SYNDIG1Q9H7V2 258 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 HCN3Q9P1Z3 774 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 COPS3Q9UNS2 423 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 SATB2Q9UPW6 733 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 SPACA6W5XKT8 324 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 CHD9Q3L8U1 2897 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 J3QRE1 110 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 MPC2O95563 127 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 AGR2O95994 175 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 CTSBP07858 339 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 VASPP50552 380 aaPredicted RBP13.25□□□□□ -0.29
CPSF7-201ENST00000340437 PPP1CAP62136 330 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 TFF2Q03403 129 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 HSF2Q03933 536 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 GPM6BQ13491 265 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 GRK1Q15835 563 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 PAQR7Q86WK9 346 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 OR52B4Q8NGK2 314 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 ADAMTS14Q8WXS8 1223 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 OR2M2Q96R28 347 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 CNN2Q99439 309 aaKnown RBP13.25□□□□□ -0.29
CPSF7-201ENST00000340437 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.25□□□□□ -0.298e-9■■□□□ 12.1
CPSF7-201ENST00000340437 B3GNT2Q9NY97 397 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 MYO15AQ9UKN7 3530 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 CARNS1A5YM72 827 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 OR7A10O76100 309 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 OR8G3PP0DMU2 310 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 EN2P19622 333 aaPredicted RBP13.25□□□□□ -0.29
CPSF7-201ENST00000340437 TAS2R43P59537 309 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 GARNL3Q5VVW2 1013 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 ZNF425Q6IV72 752 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 TPRA1Q86W33 373 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 LIX1LQ8IVB5 337 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 COQ8AQ8NI60 647 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 ELMOD3Q96FG2 381 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 TIMM29Q9BSF4 260 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 EMC7Q9NPA0 242 aa13.25□□□□□ -0.29
CPSF7-201ENST00000340437 PRICKLE3O43900 615 aaPredicted RBP13.24□□□□□ -0.29
CPSF7-201ENST00000340437 UGT2B7P16662 529 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 C19orf57Q0VDD7 668 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 NLRC3Q7RTR2 1065 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 FAM3CQ92520 227 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 KCTD12Q96CX2 325 aaKnown RBP13.24□□□□□ -0.29
CPSF7-201ENST00000340437 ZNF764Q96H86 408 aaPredicted RBP13.24□□□□□ -0.29
CPSF7-201ENST00000340437 ULBP3Q9BZM4 244 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 ZNF350Q9GZX5 532 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 DLL4Q9NR61 685 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 ING1Q9UK53 422 aaPredicted RBP13.24□□□□□ -0.29
CPSF7-201ENST00000340437 PRKACBP22694 351 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 DCTDP32321 178 aa13.24□□□□□ -0.29
CPSF7-201ENST00000340437 C1orf61Q13536 156 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms