RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 HMGN1P05114 100 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 RPS19P39019 145 aaKnown RBP18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 FBXW4P57775 412 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 DEFA1P59665 94 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 DEFA3P59666 94 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 KCNJ8Q15842 424 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 CCBE1Q6UXH8 406 aaPredicted RBP18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 RAB11FIP2Q7L804 512 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 AKAP14Q86UN6 197 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 PROKR2Q8NFJ6 384 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 DEPDC7Q96QD5 511 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 STRADBQ9C0K7 418 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 SIAEQ9HAT2 523 aa18.49■□□□□ 0.55
RIPPLY3-201ENST00000329553 IGKV1D-42A0A075B6H8 117 aa18.48■□□□□ 0.55
RIPPLY3-201ENST00000329553 ELOA3DA6NLF2 546 aaPredicted RBP18.48■□□□□ 0.55
RIPPLY3-201ENST00000329553 LRRN3E7EW58 273 aa18.48■□□□□ 0.55
RIPPLY3-201ENST00000329553 EIF4E2O60573 245 aaKnown RBP18.48■□□□□ 0.55
RIPPLY3-201ENST00000329553 ZFAND5O76080 213 aa18.48■□□□□ 0.55
RIPPLY3-201ENST00000329553 TNFSF8P32971 234 aa18.48■□□□□ 0.55
RIPPLY3-201ENST00000329553 E2F1Q01094 437 aa18.48■□□□□ 0.55
RIPPLY3-201ENST00000329553 PCOLCEQ15113 449 aa18.48■□□□□ 0.55
RIPPLY3-201ENST00000329553 ISXQ2M1V0 245 aa18.48■□□□□ 0.55
RIPPLY3-201ENST00000329553 ELOA3BQ3SY89 546 aa18.48■□□□□ 0.55
RIPPLY3-201ENST00000329553 RPL13AP3Q6NVV1 102 aa18.48■□□□□ 0.55
RIPPLY3-201ENST00000329553 ELOA3Q8NG57 546 aa18.48■□□□□ 0.55
RIPPLY3-201ENST00000329553 OR5L2Q8NGL0 311 aa18.48■□□□□ 0.55
RIPPLY3-201ENST00000329553 ZNF563Q8TA94 476 aa18.48■□□□□ 0.55
RIPPLY3-201ENST00000329553 SGTBQ96EQ0 304 aa18.48■□□□□ 0.55
RIPPLY3-201ENST00000329553 BARHL1Q9BZE3 327 aa18.48■□□□□ 0.55
RIPPLY3-201ENST00000329553 SMURF1Q9HCE7 757 aa18.48■□□□□ 0.55
RIPPLY3-201ENST00000329553 MED17Q9NVC6 651 aa18.48■□□□□ 0.55
RIPPLY3-201ENST00000329553 NDUFB11Q9NX14 153 aa18.48■□□□□ 0.55
RIPPLY3-201ENST00000329553 CACNA1HO95180 2353 aa18.48■□□□□ 0.55
RIPPLY3-201ENST00000329553 KDM4EB2RXH2 506 aaPredicted RBP18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 ADAM10O14672 748 aa18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 PRODHO43272 600 aa18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 STK17BO94768 372 aa18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 PSMA1P25786 263 aaKnown RBP18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 ITPKBP27987 946 aa18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 SLC6A8P48029 635 aa18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 TOMM34Q15785 309 aaPredicted RBP18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 AADACL4Q5VUY2 407 aa18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 LNX2Q8N448 690 aa18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 LRRC17Q8N6Y2 441 aa18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 MCCC2Q9HCC0 563 aa18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 STUB1Q9UNE7 303 aa18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 ZNF318Q5VUA4 2279 aa18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 HTR3EA5X5Y0 456 aa18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 C4orf47A7E2U8 309 aa18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 PNMTP11086 282 aa18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 SLC1A3P43003 542 aa18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 MLLT11Q13015 90 aaPredicted RBP18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 EFR3AQ14156 821 aa18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 SLC35F1Q5T1Q4 408 aa18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 TRMT61AQ96FX7 289 aaKnown RBP18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 CEP19Q96LK0 163 aa18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 CCNL2Q96S94 520 aaPredicted RBP18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 IFT27Q9BW83 186 aa18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 ADAM19Q9H013 955 aa18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 EXOSC4Q9NPD3 245 aaKnown RBP18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 MYOTQ9UBF9 498 aa18.47■□□□□ 0.55
RIPPLY3-201ENST00000329553 ZNF670-ZNF695F2Z2N8 137 aa18.46■□□□□ 0.55
RIPPLY3-201ENST00000329553 CDCP2Q5VXM1 449 aa18.46■□□□□ 0.55
RIPPLY3-201ENST00000329553 RTL4Q6ZR62 310 aa18.46■□□□□ 0.55
RIPPLY3-201ENST00000329553 SCAIQ8N9R8 606 aa18.46■□□□□ 0.55
RIPPLY3-201ENST00000329553 OR2Y1Q8NGV0 311 aa18.46■□□□□ 0.55
RIPPLY3-201ENST00000329553 OR5W2Q8NH69 310 aa18.46■□□□□ 0.55
RIPPLY3-201ENST00000329553 DUSP19Q8WTR2 217 aa18.46■□□□□ 0.55
RIPPLY3-201ENST00000329553 HINT3Q9NQE9 182 aaKnown RBP18.46■□□□□ 0.55
RIPPLY3-201ENST00000329553 PISDQ9UG56 409 aa18.46■□□□□ 0.55
RIPPLY3-201ENST00000329553 MPDZO75970 2070 aa18.46■□□□□ 0.55
RIPPLY3-201ENST00000329553 TACR3P29371 465 aa18.46■□□□□ 0.55
RIPPLY3-201ENST00000329553 GAS1P54826 345 aa18.46■□□□□ 0.55
RIPPLY3-201ENST00000329553 FOXK2Q01167 660 aa18.46■□□□□ 0.55
RIPPLY3-201ENST00000329553 CARTPTQ16568 116 aa18.46■□□□□ 0.55
RIPPLY3-201ENST00000329553 OR52I1Q8NGK6 324 aa18.46■□□□□ 0.55
RIPPLY3-201ENST00000329553 ELP5Q8TE02 316 aa18.46■□□□□ 0.55
RIPPLY3-201ENST00000329553 HGDQ93099 445 aa18.46■□□□□ 0.55
RIPPLY3-201ENST00000329553 SLC19A3Q9BZV2 496 aa18.46■□□□□ 0.55
RIPPLY3-201ENST00000329553 MRPS18AQ9NVS2 196 aaKnown RBP18.46■□□□□ 0.55
RIPPLY3-201ENST00000329553 ERVK13-1Q9NX77 482 aa18.46■□□□□ 0.55
RIPPLY3-201ENST00000329553 DIMT1Q9UNQ2 313 aaKnown RBP18.46■□□□□ 0.55
RIPPLY3-201ENST00000329553 EXPH5Q8NEV8 1989 aa18.46■□□□□ 0.55
RIPPLY3-201ENST00000329553 IGHV1-45A0A0A0MS14 117 aa18.45■□□□□ 0.54
RIPPLY3-201ENST00000329553 CASP3P42574 277 aa18.45■□□□□ 0.54
RIPPLY3-201ENST00000329553 RORCP51449 518 aa18.45■□□□□ 0.54
RIPPLY3-201ENST00000329553 BTBD16Q32M84 506 aa18.45■□□□□ 0.54
RIPPLY3-201ENST00000329553 PAQR6Q6TCH4 344 aa18.45■□□□□ 0.54
RIPPLY3-201ENST00000329553 CPOQ8IVL8 374 aa18.45■□□□□ 0.54
RIPPLY3-201ENST00000329553 PHC2Q8IXK0 858 aa18.45■□□□□ 0.54
RIPPLY3-201ENST00000329553 BBS1Q8NFJ9 593 aa18.45■□□□□ 0.54
RIPPLY3-201ENST00000329553 IL17RDQ8NFM7 739 aa18.45■□□□□ 0.54
RIPPLY3-201ENST00000329553 CDC6Q99741 560 aa18.45■□□□□ 0.54
RIPPLY3-201ENST00000329553 HS3ST3B1Q9Y662 390 aa18.45■□□□□ 0.54
RIPPLY3-201ENST00000329553 FAM183AA6NL82 134 aa18.45■□□□□ 0.54
RIPPLY3-201ENST00000329553 SNTNA6NMZ2 147 aa18.45■□□□□ 0.54
RIPPLY3-201ENST00000329553 NUDT14O95848 222 aa18.45■□□□□ 0.54
RIPPLY3-201ENST00000329553 APOA1P02647 267 aa18.45■□□□□ 0.54
RIPPLY3-201ENST00000329553 EGR4Q05215 589 aa18.45■□□□□ 0.54
RIPPLY3-201ENST00000329553 TIPARPQ7Z3E1 657 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms