RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 OR51V1Q9H2C8 321 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 FLVCR2Q9UPI3 526 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 RASD1Q9Y272 281 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 NUBP2Q9Y5Y2 271 aa14.34□□□□□ -0.11
SHROOM1-201ENST00000319854 UNC13CQ8NB66 2214 aa14.33□□□□□ -0.11
SHROOM1-201ENST00000319854 URADA6NGE7 173 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 GMFGO60234 142 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 TNFP01375 233 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 MT-ND4P03905 459 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 PGDP52209 483 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 SFRP5Q5T4F7 317 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 SLC36A4Q6YBV0 504 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 ACOT11Q8WXI4 607 aaPredicted RBP14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 DNAJA3Q96EY1 480 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 ARHGDIGQ99819 225 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 BRD7Q9NPI1 651 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 IFT46Q9NQC8 304 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 NKIRAS2Q9NYR9 191 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 PTTG3PQ9NZH4 202 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 CALML5Q9NZT1 146 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 EXOSC1Q9Y3B2 195 aaKnown RBP14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 HRH3Q9Y5N1 445 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 SPAG17Q6Q759 2223 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 TRAV27A0A087WT01 109 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 C2orf74A8MZ97 194 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 SOX30O94993 753 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 GYPBP06028 91 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 GSTM3P21266 225 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 HTR2AP28223 471 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 DGCR2P98153 550 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 OPCMLQ14982 345 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 TMEM184AQ6ZMB5 413 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 LRRC28Q86X40 367 aaPredicted RBP14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 SLC44A3Q8N4M1 653 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 LSM14AQ8ND56 463 aaKnown RBP14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 PEX11GQ96HA9 241 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 DMRTA2Q96SC8 542 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 H2AFY2Q9P0M6 372 aaPredicted RBP14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 SCP2D1Q9UJQ7 156 aa14.33□□□□□ -0.12
SHROOM1-201ENST00000319854 REM1O75628 298 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 LPLP06858 475 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 CXCL2P19875 107 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 TBXA2RP21731 343 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 NDUFA9Q16795 377 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 NDUFAF6Q330K2 333 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 MINDY4Q4G0A6 757 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 ARMC6Q6NXE6 501 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 OR2L13Q8N349 312 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 PTGFRNQ9P2B2 879 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 SPATA2Q9UM82 520 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 MRPS7Q9Y2R9 242 aaKnown RBP14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 RNF215Q9Y6U7 377 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 TP53BP1Q12888 1972 aaPredicted RBP14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 SLC9B1P1A6NJY1 282 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 ZNF593O00488 134 aaPredicted RBP14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 IGHV4-34P06331 123 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 DRD1P21728 446 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 TSPAN5P62079 268 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 RGS7BPQ6MZT1 257 aaPredicted RBP14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 Q6ZTK2 550 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 ESPNLQ6ZVH7 1005 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 OR52R1Q8NGF1 315 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 ZNF436Q9C0F3 470 aaPredicted RBP14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 SPACA6W5XKT8 324 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 H2AFB2P0C5Z0 115 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 PRKAR1BP31321 381 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 BLVRAP53004 296 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 RAB30Q15771 203 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 OOSP2Q86WS3 158 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 OR13C2Q8NGS9 318 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 YIPF5Q969M3 257 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 TM4SF19Q96DZ7 209 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 HINT3Q9NQE9 182 aaKnown RBP14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 PILRAQ9UKJ1 303 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 POMT2Q9UKY4 750 aa14.32□□□□□ -0.12
SHROOM1-201ENST00000319854 A0A0B4J203 849 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 SDC3O75056 442 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 STX11O75558 287 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 WNT1P04628 370 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 ALDOBP05062 364 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 MAKP20794 623 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 ZNF10P21506 573 aaPredicted RBP14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 LCN1P31025 176 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 TSFMP43897 325 aaKnown RBP14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 OR1Q1Q15612 314 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 SLC25A35Q3KQZ1 300 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 GXYLT1Q4G148 440 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 CLVS2Q5SYC1 327 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 TOMM5Q8N4H5 51 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 OR51L1Q8NGJ5 315 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 BAHD1Q8TBE0 780 aaPredicted RBP14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 ADAMTS14Q8WXS8 1223 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 THAP4Q8WY91 577 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 CNOT9Q92600 299 aaKnown RBP14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 PTP4A1Q93096 173 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 ZFP3Q96NJ6 502 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 HCAR1Q9BXC0 346 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 MRPL15Q9P015 296 aaKnown RBP14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 A0A1B0GVI7 797 aa14.31□□□□□ -0.12
SHROOM1-201ENST00000319854 CLUP10909 449 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms