RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 TEAD3Q99594 435 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 GALNT9Q9HCQ5 603 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 NRIP3Q9NQ35 241 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 TAS2R10Q9NYW0 307 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 TNFRSF10DQ9UBN6 386 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 PISDQ9UG56 409 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 FBXL4Q9UKA2 621 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 DKK1O94907 266 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 IFNGP01579 166 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 IGHA1P01876 353 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 CLUP10909 449 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 FOLR3P41439 243 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 WNT4P56705 351 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 PRPS1P60891 318 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 C17orf67Q0P5P2 114 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 MLLT11Q13015 90 aaPredicted RBP20.25■□□□□ 0.83
SMAD1-201ENST00000302085 C1DQ13901 141 aaKnown RBP20.25■□□□□ 0.83
SMAD1-201ENST00000302085 KLHL12Q53G59 568 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 C1QL3Q5VWW1 255 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 TIPARPQ7Z3E1 657 aaKnown RBP20.25■□□□□ 0.83
SMAD1-201ENST00000302085 ZBTB46Q86UZ6 589 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 ADGRG3Q86Y34 549 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 LRRC75AQ8NAA5 344 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 OR51G2Q8NGK0 314 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 RASL10BQ96S79 203 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 OR51V1Q9H2C8 321 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 PADI1Q9ULC6 663 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 HIF3AQ9Y2N7 669 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 LOC100506127A0A0U1RQW1 187 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 BLOC1S5-TXNDC5H3BN57 136 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 ARPC3O15145 178 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 CLPXO76031 633 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 FBXO45P0C2W1 286 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 ATP6V1E1P36543 226 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 POLR2HP52434 150 aaKnown RBP20.25■□□□□ 0.83
SMAD1-201ENST00000302085 ERVK-25P63136 954 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 C6orf15Q6UXA7 325 aaPredicted RBP20.25■□□□□ 0.83
SMAD1-201ENST00000302085 ZNF485Q8NCK3 441 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 SLC22A8Q8TCC7 542 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 GATAD2BQ8WXI9 593 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 ZHX1-C8orf76Q96EF9 292 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 GPX7Q96SL4 187 aaPredicted RBP20.25■□□□□ 0.83
SMAD1-201ENST00000302085 CHCHD6Q9BRQ6 235 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 JAM3Q9BX67 310 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 RNF167Q9H6Y7 350 aa20.25■□□□□ 0.83
SMAD1-201ENST00000302085 TMED7-TICAM2A0A0A6YYA0 188 aa20.24■□□□□ 0.83
SMAD1-201ENST00000302085 A0A1W2PNU3 283 aaPredicted RBP20.24■□□□□ 0.83
SMAD1-201ENST00000302085 TMEM72A0PK05 275 aa20.24■□□□□ 0.83
SMAD1-201ENST00000302085 C4orf47A7E2U8 309 aa20.24■□□□□ 0.83
SMAD1-201ENST00000302085 UGT2B10P36537 528 aa20.24■□□□□ 0.83
SMAD1-201ENST00000302085 RPS5P46782 204 aaKnown RBP20.24■□□□□ 0.83
SMAD1-201ENST00000302085 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.24■□□□□ 0.83
SMAD1-201ENST00000302085 FAM98AQ8NCA5 519 aaKnown RBP20.24■□□□□ 0.83
SMAD1-201ENST00000302085 OR11G2Q8NGC1 345 aa20.24■□□□□ 0.83
SMAD1-201ENST00000302085 OR10G3Q8NGC4 313 aa20.24■□□□□ 0.83
SMAD1-201ENST00000302085 SECISBP2Q96T21 854 aaKnown RBP20.24■□□□□ 0.83
SMAD1-201ENST00000302085 DDOQ99489 341 aa20.24■□□□□ 0.83
SMAD1-201ENST00000302085 CDC6Q99741 560 aa20.24■□□□□ 0.83
SMAD1-201ENST00000302085 ZPBPQ9BS86 351 aa20.24■□□□□ 0.83
SMAD1-201ENST00000302085 CENPOQ9BU64 300 aa20.24■□□□□ 0.83
SMAD1-201ENST00000302085 SPRY4Q9C004 299 aa20.24■□□□□ 0.83
SMAD1-201ENST00000302085 ERVK13-1Q9NX77 482 aa20.24■□□□□ 0.83
SMAD1-201ENST00000302085 KLHL21Q9UJP4 597 aa20.24■□□□□ 0.83
SMAD1-201ENST00000302085 TMED7Q9Y3B3 224 aa20.24■□□□□ 0.83
SMAD1-201ENST00000302085 HRH3Q9Y5N1 445 aa20.24■□□□□ 0.83
SMAD1-201ENST00000302085 ANKUB1A6NFN9 424 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 GPX5O75715 221 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 BGLAPP02818 100 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 PTGDSP41222 190 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 RPS3AP61247 264 aaKnown RBP20.23■□□□□ 0.83
SMAD1-201ENST00000302085 TMED1Q13445 227 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 EXT1Q16394 746 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 GRINAQ7Z429 371 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 PSD4Q8NDX1 1056 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 M1APQ8TC57 530 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 TM9SF4Q92544 642 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 LIN37Q96GY3 246 aaPredicted RBP20.23■□□□□ 0.83
SMAD1-201ENST00000302085 DCSTAMPQ9H295 470 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 KLHL1Q9NR64 748 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 MED11Q9P086 117 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 PMF1-BGLAPU3KQ54 211 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 A0A0C4DFX4 3053 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 TRAV36DV7A0A075B6V5 113 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 SUSD5O60279 629 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 DLGAP3O95886 979 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 MT-CO3P00414 261 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 UQCRC1P31930 480 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 TMED10P49755 219 aaKnown RBP20.23■□□□□ 0.83
SMAD1-201ENST00000302085 ARMC4Q5T2S8 1044 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 PHC2Q8IXK0 858 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 SLC15A4Q8N697 577 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 SDR9C7Q8NEX9 313 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 KATNB1Q9BVA0 655 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 DDA1Q9BW61 102 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 TOR4AQ9NXH8 423 aa20.23■□□□□ 0.83
SMAD1-201ENST00000302085 SLC22A31A6NKX4 558 aa20.22■□□□□ 0.83
SMAD1-201ENST00000302085 IDH3BO43837 385 aa20.22■□□□□ 0.83
SMAD1-201ENST00000302085 NPIPB7O75200 414 aa20.22■□□□□ 0.83
SMAD1-201ENST00000302085 GYPBP06028 91 aa20.22■□□□□ 0.83
SMAD1-201ENST00000302085 TSPAN19P0C672 248 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms