RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 RIT1Q92963 219 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 RFT1Q96AA3 541 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 ABCG5Q9H222 651 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 S1PR5Q9H228 398 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 FBRSQ9HAH7 460 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 POT1Q9NUX5 634 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 EIF3KQ9UBQ5 218 aaKnown RBP11.85□□□□□ -0.51
HIF3A-204ENST00000300862 SPEF1Q9Y4P9 236 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 TRAV6A0A075B6T7 132 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 SCO1O75880 301 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 SEMA4FO95754 770 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 AK1P00568 194 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 GRPRP30550 384 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 SLC6A6P31641 620 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 PSMB10P40306 273 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 PITPNBP48739 271 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 HHEXQ03014 270 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 STX4Q12846 297 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 RIN1Q13671 783 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 DMKNQ6E0U4 476 aaPredicted RBP11.85□□□□□ -0.51
HIF3A-204ENST00000300862 NPSR1Q6W5P4 371 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 GPALPP1Q8IXQ4 340 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 GPBAR1Q8TDU6 330 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 AKAP1Q92667 903 aaKnown RBP eCLIP11.85□□□□□ -0.51
HIF3A-204ENST00000300862 RBM18Q96H35 190 aaKnown RBP11.85□□□□□ -0.51
HIF3A-204ENST00000300862 LMF1Q96S06 567 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 PDCD1LG2Q9BQ51 273 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 ORAI3Q9BRQ5 295 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 SLC28A3Q9HAS3 691 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 ZNF346Q9UL40 294 aaKnown RBP11.85□□□□□ -0.51
HIF3A-204ENST00000300862 ENTPD2Q9Y5L3 495 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 MPDZO75970 2070 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 B4DGG1 531 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 CD3GP09693 182 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 MAOAP21397 527 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 RPL4P36578 427 aaKnown RBP11.84□□□□□ -0.51
HIF3A-204ENST00000300862 MAGEB1P43366 347 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 PARGQ86W56 976 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 MRPL38Q96DV4 380 aaKnown RBP11.84□□□□□ -0.51
HIF3A-204ENST00000300862 PELI1Q96FA3 418 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 HYLS1Q96M11 299 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 ZFP3Q96NJ6 502 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 NMNAT3Q96T66 252 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 ZNF426Q9BUY5 554 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 PRDM9Q9NQV7 894 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 INPP5EQ9NRR6 644 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 C14orf105Q9NVL8 296 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 ST6GALNAC2Q9UJ37 374 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 IDSB3KWA1 339 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 FABP7O15540 132 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 FZD7O75084 574 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 PTBP1P26599 531 aaKnown RBP eCLIP11.84□□□□□ -0.51
HIF3A-204ENST00000300862 HTR4Q13639 388 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 ZNHIT3Q15649 155 aaPredicted RBP11.84□□□□□ -0.51
HIF3A-204ENST00000300862 BCL2L15Q5TBC7 163 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 FAM205BPQ63HN1 556 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 TMEM184AQ6ZMB5 413 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 PXKQ7Z7A4 578 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 OOSP2Q86WS3 158 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 IZUMO1Q8IYV9 350 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 OR8H1Q8NGG4 311 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 GPR137Q96N19 417 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 UBL7Q96S82 380 aaPredicted RBP11.84□□□□□ -0.51
HIF3A-204ENST00000300862 GPR174Q9BXC1 333 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 CHRNA9Q9UGM1 479 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 GNG8Q9UK08 70 aa11.84□□□□□ -0.51
HIF3A-204ENST00000300862 OR5K3A6NET4 321 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 SELENOFO60613 162 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 SC5DO75845 299 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 IFNGP01579 166 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 IGHV4-34P06331 123 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 ATF1P18846 271 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 RAB3BP20337 219 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 NPR2P20594 1047 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 SLC6A1P30531 599 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 PPM1FP49593 454 aaPredicted RBP11.83□□□□□ -0.52
HIF3A-204ENST00000300862 NRG3P56975 720 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 YPEL5P62699 121 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 MRPL28Q13084 256 aaKnown RBP11.83□□□□□ -0.52
HIF3A-204ENST00000300862 ARMC6Q6NXE6 501 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 ARHGAP11AQ6P4F7 1023 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 MCATQ8IVS2 390 aaKnown RBP11.83□□□□□ -0.52
HIF3A-204ENST00000300862 TIGD4Q8IY51 512 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 LSMEM1Q8N8F7 131 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 OR6K6Q8NGW6 343 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 THAP4Q8WY91 577 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 MARVELD3Q96A59 401 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 RASD2Q96D21 266 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 CCDC120Q96HB5 630 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 VSTM2LQ96N03 204 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 OR14A2Q96R54 314 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 TRIM2Q9C040 744 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 LMAN2LQ9H0V9 348 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 GLTPQ9NZD2 209 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 RPS6KB2Q9UBS0 482 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 ELF5Q9UKW6 265 aaPredicted RBP11.83□□□□□ -0.52
HIF3A-204ENST00000300862 COPS3Q9UNS2 423 aa11.83□□□□□ -0.52
HIF3A-204ENST00000300862 AK6Q9Y3D8 172 aaKnown RBP11.83□□□□□ -0.52
HIF3A-204ENST00000300862 TP53BP1Q12888 1972 aaPredicted RBP11.83□□□□□ -0.52
HIF3A-204ENST00000300862 A0A087WV48 116 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms