RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 KLF13Q9Y2Y9 288 aaPredicted RBP22.24■■□□□ 1.15
GTF2A1-201ENST00000298173 CFAP47Q6ZTR5 3102 aa22.24■■□□□ 1.15
GTF2A1-201ENST00000298173 TRAV27A0A087WT01 109 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 TSPAN19P0C672 248 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 CHN2P52757 468 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 NUP107P57740 925 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 RPS4XP62701 263 aaKnown RBP22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 EFNB1P98172 346 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 CTU2Q2VPK5 515 aaKnown RBP22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 FAM69AQ5T7M9 428 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 SLC27A4Q6P1M0 643 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 SMARCD3Q6STE5 483 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 ENTHD1Q8IYW4 607 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 OR5M1Q8NGP8 315 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 RHOXF1Q8NHV9 184 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 SLC39A7Q92504 469 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 UBL7Q96S82 380 aaPredicted RBP22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 TSSK6Q9BXA6 273 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 FKRPQ9H9S5 495 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 NANSQ9NR45 359 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 KLHL1Q9NR64 748 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 SERINC1Q9NRX5 453 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 RRP8O43159 456 aaKnown RBP22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 GABRB1P18505 474 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 FKBP2P26885 142 aaKnown RBP22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 SMSP52788 366 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 CDK5R2Q13319 367 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 MAD2L1BPQ15013 274 aaPredicted RBP22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 THSD4Q6ZMP0 1018 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 GALNTL5Q7Z4T8 443 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 DEPDC4Q8N2C3 294 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 IQCF1Q8N6M8 205 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 FAM81AQ8TBF8 368 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 ARL5BQ96KC2 179 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 ZNF226Q9NYT6 803 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 ZNF229Q9UJW7 825 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 DKKL1Q9UK85 242 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 RNF6Q9Y252 685 aa22.23■■□□□ 1.15
GTF2A1-201ENST00000298173 FTCDNL1E5RQL4 147 aa22.22■■□□□ 1.15
GTF2A1-201ENST00000298173 KLRC4-KLRK1H3BQV0 150 aa22.22■■□□□ 1.15
GTF2A1-201ENST00000298173 K7ENP7 123 aa22.22■■□□□ 1.15
GTF2A1-201ENST00000298173 OR2T1O43869 369 aa22.22■■□□□ 1.15
GTF2A1-201ENST00000298173 MT-ATP6P00846 226 aa22.22■■□□□ 1.15
GTF2A1-201ENST00000298173 ZNF17P17021 662 aa22.22■■□□□ 1.15
GTF2A1-201ENST00000298173 BMP7P18075 431 aa22.22■■□□□ 1.15
GTF2A1-201ENST00000298173 TPD52P55327 224 aaPredicted RBP22.22■■□□□ 1.15
GTF2A1-201ENST00000298173 B3GALT5-AS1P59052 145 aa22.22■■□□□ 1.15
GTF2A1-201ENST00000298173 CDC42P60953 191 aa22.22■■□□□ 1.15
GTF2A1-201ENST00000298173 IL5RAQ01344 420 aa22.22■■□□□ 1.15
GTF2A1-201ENST00000298173 HYAL4Q2M3T9 481 aa22.22■■□□□ 1.15
GTF2A1-201ENST00000298173 INO80CQ6PI98 192 aaPredicted RBP22.22■■□□□ 1.15
GTF2A1-201ENST00000298173 SLC43A2Q8N370 569 aa22.22■■□□□ 1.15
GTF2A1-201ENST00000298173 OR4Q3Q8NH05 313 aa22.22■■□□□ 1.15
GTF2A1-201ENST00000298173 FANK1Q8TC84 345 aa22.22■■□□□ 1.15
GTF2A1-201ENST00000298173 DDIT4LQ96D03 193 aa22.22■■□□□ 1.15
GTF2A1-201ENST00000298173 C5orf34Q96MH7 638 aa22.22■■□□□ 1.15
GTF2A1-201ENST00000298173 TBC1D23Q9NUY8 699 aa22.22■■□□□ 1.15
GTF2A1-201ENST00000298173 RPH3AQ9Y2J0 694 aaPredicted RBP22.22■■□□□ 1.15
GTF2A1-201ENST00000298173 HIF3AQ9Y2N7 669 aa22.22■■□□□ 1.15
GTF2A1-201ENST00000298173 CSAG2Q9Y5P2 127 aa22.22■■□□□ 1.15
GTF2A1-201ENST00000298173 FRYQ5TBA9 3013 aa22.21■■□□□ 1.15
GTF2A1-201ENST00000298173 LAMA5O15230 3695 aa22.21■■□□□ 1.15
GTF2A1-201ENST00000298173 ELK4P28324 431 aa22.21■■□□□ 1.15
GTF2A1-201ENST00000298173 SELENBP1Q13228 472 aa22.21■■□□□ 1.15
GTF2A1-201ENST00000298173 ANKDD1AQ495B1 522 aa22.21■■□□□ 1.15
GTF2A1-201ENST00000298173 ZNF766Q5HY98 468 aa22.21■■□□□ 1.15
GTF2A1-201ENST00000298173 CLEC12AQ5QGZ9 265 aa22.21■■□□□ 1.15
GTF2A1-201ENST00000298173 C3orf33Q6P1S2 294 aa22.21■■□□□ 1.15
GTF2A1-201ENST00000298173 IGFL3Q6UXB1 125 aa22.21■■□□□ 1.15
GTF2A1-201ENST00000298173 OR2B2Q9GZK3 357 aa22.21■■□□□ 1.15
GTF2A1-201ENST00000298173 AASSQ9UDR5 926 aa22.21■■□□□ 1.15
GTF2A1-201ENST00000298173 IL20RAQ9UHF4 553 aa22.21■■□□□ 1.15
GTF2A1-201ENST00000298173 PCDHGA9Q9Y5G4 932 aaKnown RBP22.21■■□□□ 1.15
GTF2A1-201ENST00000298173 MED12Q93074 2177 aa22.21■■□□□ 1.15
GTF2A1-201ENST00000298173 OR2M5A3KFT3 312 aa22.2■■□□□ 1.15
GTF2A1-201ENST00000298173 BHLHE40O14503 412 aa22.2■■□□□ 1.15
GTF2A1-201ENST00000298173 FZD7O75084 574 aa22.2■■□□□ 1.15
GTF2A1-201ENST00000298173 GLSO94925 669 aaPredicted RBP22.2■■□□□ 1.15
GTF2A1-201ENST00000298173 TCEA1P23193 301 aaKnown RBP22.2■■□□□ 1.15
GTF2A1-201ENST00000298173 CLK1P49759 484 aaKnown RBP22.2■■□□□ 1.15
GTF2A1-201ENST00000298173 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.2■■□□□ 1.155e-7■□□□□ 8.1
GTF2A1-201ENST00000298173 SYT14P1Q58G82 188 aa22.2■■□□□ 1.15
GTF2A1-201ENST00000298173 C10orf53Q8N6V4 93 aa22.2■■□□□ 1.15
GTF2A1-201ENST00000298173 ZFP62Q8NB50 900 aaPredicted RBP22.2■■□□□ 1.15
GTF2A1-201ENST00000298173 OR2T33Q8NG76 320 aa22.2■■□□□ 1.15
GTF2A1-201ENST00000298173 MFSD8Q8NHS3 518 aa22.2■■□□□ 1.15
GTF2A1-201ENST00000298173 SLC25A43Q8WUT9 341 aaPredicted RBP22.2■■□□□ 1.15
GTF2A1-201ENST00000298173 APH1BQ8WW43 257 aa22.2■■□□□ 1.15
GTF2A1-201ENST00000298173 TRUB1Q8WWH5 349 aaKnown RBP22.2■■□□□ 1.15
GTF2A1-201ENST00000298173 ZNF703Q9H7S9 590 aaPredicted RBP22.2■■□□□ 1.15
GTF2A1-201ENST00000298173 SPIN1Q9Y657 262 aaPredicted RBP22.2■■□□□ 1.15
GTF2A1-201ENST00000298173 WBP4O75554 376 aaKnown RBP22.2■■□□□ 1.14
GTF2A1-201ENST00000298173 NDUFB2O95178 105 aa22.2■■□□□ 1.14
GTF2A1-201ENST00000298173 AHSA1O95433 338 aa22.2■■□□□ 1.14
GTF2A1-201ENST00000298173 LYNP07948 512 aa22.2■■□□□ 1.14
GTF2A1-201ENST00000298173 C6orf141Q5SZD1 244 aa22.2■■□□□ 1.14
GTF2A1-201ENST00000298173 LNX2Q8N448 690 aa22.2■■□□□ 1.14
GTF2A1-201ENST00000298173 TMEM178AQ8NBL3 297 aa22.2■■□□□ 1.14
GTF2A1-201ENST00000298173 FAM83FQ8NEG4 500 aaPredicted RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms