RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 TAS2R43P59537 309 aa22.4■■□□□ 1.18
SPTSSA-201ENST00000298130 MAT1AQ00266 395 aaKnown RBP22.4■■□□□ 1.18
SPTSSA-201ENST00000298130 FGFBP1Q14512 234 aa22.4■■□□□ 1.18
SPTSSA-201ENST00000298130 NFATC4Q14934 902 aa22.4■■□□□ 1.18
SPTSSA-201ENST00000298130 NUDT18Q6ZVK8 323 aa22.4■■□□□ 1.18
SPTSSA-201ENST00000298130 METTL27Q8N6F8 245 aaPredicted RBP22.4■■□□□ 1.18
SPTSSA-201ENST00000298130 SMIM19Q96E16 107 aa22.4■■□□□ 1.18
SPTSSA-201ENST00000298130 DPCDQ9BVM2 203 aaPredicted RBP22.4■■□□□ 1.18
SPTSSA-201ENST00000298130 CHIAQ9BZP6 476 aa22.4■■□□□ 1.18
SPTSSA-201ENST00000298130 SATB2Q9UPW6 733 aa22.4■■□□□ 1.18
SPTSSA-201ENST00000298130 HEATR5AQ86XA9 2040 aa22.4■■□□□ 1.18
SPTSSA-201ENST00000298130 C7orf66A4D0T2 115 aa22.39■■□□□ 1.18
SPTSSA-201ENST00000298130 UBL3O95164 117 aa22.39■■□□□ 1.18
SPTSSA-201ENST00000298130 POU4F3Q15319 338 aa22.39■■□□□ 1.18
SPTSSA-201ENST00000298130 RPL13AP3Q6NVV1 102 aa22.39■■□□□ 1.18
SPTSSA-201ENST00000298130 ZNF613Q6PF04 617 aa22.39■■□□□ 1.18
SPTSSA-201ENST00000298130 FAM109AQ8N4B1 249 aa22.39■■□□□ 1.18
SPTSSA-201ENST00000298130 HSPA12BQ96MM6 686 aa22.39■■□□□ 1.18
SPTSSA-201ENST00000298130 CNN2Q99439 309 aaKnown RBP22.39■■□□□ 1.18
SPTSSA-201ENST00000298130 TSPAN10Q9H1Z9 355 aaPredicted RBP22.39■■□□□ 1.18
SPTSSA-201ENST00000298130 LRIT1Q9P2V4 623 aa22.39■■□□□ 1.18
SPTSSA-201ENST00000298130 OR6C68A6NDL8 312 aa22.39■■□□□ 1.17
SPTSSA-201ENST00000298130 LEUTXA8MZ59 168 aa22.39■■□□□ 1.17
SPTSSA-201ENST00000298130 PIN1P1O15428 100 aa22.39■■□□□ 1.17
SPTSSA-201ENST00000298130 SCO1O75880 301 aa22.39■■□□□ 1.17
SPTSSA-201ENST00000298130 IFNGP01579 166 aa22.39■■□□□ 1.17
SPTSSA-201ENST00000298130 FCER2P06734 321 aa22.39■■□□□ 1.17
SPTSSA-201ENST00000298130 H2AFB2P0C5Z0 115 aa22.39■■□□□ 1.17
SPTSSA-201ENST00000298130 GDNFP39905 211 aa22.39■■□□□ 1.17
SPTSSA-201ENST00000298130 GBX2P52951 348 aaPredicted RBP22.39■■□□□ 1.17
SPTSSA-201ENST00000298130 PIAS4Q8N2W9 510 aaPredicted RBP22.39■■□□□ 1.17
SPTSSA-201ENST00000298130 MS4A15Q8N5U1 240 aa22.39■■□□□ 1.17
SPTSSA-201ENST00000298130 LMF1Q96S06 567 aa22.39■■□□□ 1.17
SPTSSA-201ENST00000298130 STACQ99469 402 aa22.39■■□□□ 1.17
SPTSSA-201ENST00000298130 CCDC3Q9BQI4 270 aa22.39■■□□□ 1.17
SPTSSA-201ENST00000298130 CHRNA9Q9UGM1 479 aa22.39■■□□□ 1.17
SPTSSA-201ENST00000298130 RCE1Q9Y256 329 aa22.39■■□□□ 1.17
SPTSSA-201ENST00000298130 SPACA6W5XKT8 324 aa22.39■■□□□ 1.17
SPTSSA-201ENST00000298130 ZNF593O00488 134 aaPredicted RBP22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 ICMTO60725 284 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 ANXA3P12429 323 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 ZNF10P21506 573 aaPredicted RBP22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 PER3P56645 1201 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 GSG1Q2KHT4 349 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 ODF4Q2M2E3 257 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 ALG11Q2TAA5 492 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 SDE2Q6IQ49 451 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 ZNF767PQ75MW2 155 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 ZNF511Q8NB15 262 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 ZNF527Q8NB42 609 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 ZNF784Q8NCA9 323 aaPredicted RBP22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 GFI1Q99684 422 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 OR10A4Q9H209 315 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 KLK11Q9UBX7 282 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 NUBP2Q9Y5Y2 271 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 A0A1B0GTH9 108 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 TGFBR3LH3BV60 316 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 GALR3O60755 368 aaPredicted RBP22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 EGFP01133 1207 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 PBX2P40425 430 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 RPS27P42677 84 aaKnown RBP22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 ZBTB37Q5TC79 503 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 ARHGAP11AQ6P4F7 1023 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 SPRTNQ9H040 489 aaPredicted RBP22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 A0A0A6YYC8 382 aaPredicted RBP22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 ZSCAN5BA6NJL1 495 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 I3L1I5 382 aaPredicted RBP22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 MAP3K8P41279 467 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 ZNF81P51508 661 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 NANOS3P60323 173 aaKnown RBP22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 RPS15P62841 145 aaKnown RBP22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 C1orf61Q13536 156 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 HSD17B12Q53GQ0 312 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 EXOSC6Q5RKV6 272 aaKnown RBP22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 FCRLAQ7L513 359 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 OR4C3Q8NH37 302 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 COQ3Q9NZJ6 369 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 RWDD3Q9Y3V2 267 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 NPFFR2Q9Y5X5 522 aa22.38■■□□□ 1.17
SPTSSA-201ENST00000298130 A0A087WV62 115 aa22.37■■□□□ 1.17
SPTSSA-201ENST00000298130 A6NCN8 305 aa22.37■■□□□ 1.17
SPTSSA-201ENST00000298130 GPR171O14626 319 aa22.37■■□□□ 1.17
SPTSSA-201ENST00000298130 SELENOPP49908 381 aa22.37■■□□□ 1.17
SPTSSA-201ENST00000298130 RCBTB1Q8NDN9 531 aa22.37■■□□□ 1.17
SPTSSA-201ENST00000298130 ANKRD10Q9NXR5 420 aa22.37■■□□□ 1.17
SPTSSA-201ENST00000298130 NCDNQ9UBB6 729 aa22.37■■□□□ 1.17
SPTSSA-201ENST00000298130 TDRD6O60522 2096 aaKnown RBP22.37■■□□□ 1.17
SPTSSA-201ENST00000298130 CIB4A0PJX0 185 aa22.37■■□□□ 1.17
SPTSSA-201ENST00000298130 BLOC1S5-TXNDC5H3BN57 136 aa22.37■■□□□ 1.17
SPTSSA-201ENST00000298130 TNFSF14O43557 240 aa22.37■■□□□ 1.17
SPTSSA-201ENST00000298130 CRYZL1O95825 349 aa22.37■■□□□ 1.17
SPTSSA-201ENST00000298130 SOX2P48431 317 aa22.37■■□□□ 1.17
SPTSSA-201ENST00000298130 MMP15P51511 669 aa22.37■■□□□ 1.17
SPTSSA-201ENST00000298130 ACTC1P68032 377 aa22.37■■□□□ 1.17
SPTSSA-201ENST00000298130 ACTA1P68133 377 aa22.37■■□□□ 1.17
SPTSSA-201ENST00000298130 TRAM1Q15629 374 aa22.37■■□□□ 1.17
SPTSSA-201ENST00000298130 C7orf61Q8IZ16 206 aa22.37■■□□□ 1.17
SPTSSA-201ENST00000298130 SREK1IP1Q8N9Q2 155 aaPredicted RBP22.37■■□□□ 1.17
SPTSSA-201ENST00000298130 ZNF680Q8NEM1 530 aa22.37■■□□□ 1.17
SPTSSA-201ENST00000298130 LYRM4Q9HD34 91 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms