RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 MRPL2Q5T653 305 aaKnown RBP15.38■□□□□ 0.05
CPSF4-201ENST00000292476 CDCP2Q5VXM1 449 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 RAB11FIP2Q7L804 512 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 UBQLNLQ8IYU4 475 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 GATAD2BQ8WXI9 593 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 MR1Q95460 341 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 TP53INP1Q96A56 240 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 C1GALT1C1Q96EU7 318 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 SPSB2Q99619 263 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 KATNB1Q9BVA0 655 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 NUDT9Q9BW91 350 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 MIXL1Q9H2W2 232 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 C14orf119Q9NWQ9 140 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 PPIEQ9UNP9 301 aaKnown RBP15.38■□□□□ 0.05
CPSF4-201ENST00000292476 IL33O95760 270 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 JMJD7P0C870 316 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 HPGDP15428 266 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 OR2B6P58173 313 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 EBPQ15125 230 aaKnown RBP15.38■□□□□ 0.05
CPSF4-201ENST00000292476 KCNJ8Q15842 424 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 MAPK14Q16539 360 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 HES3Q5TGS1 186 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 TMEM164Q5U3C3 297 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 SLC30A6Q6NXT4 461 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 TMEM205Q6UW68 189 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 ZNF550Q7Z398 422 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 ZNF440Q8IYI8 595 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 SLC43A2Q8N370 569 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 ARIH2OSQ8N7S6 290 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 OR4N2Q8NGD1 307 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 OR8K3Q8NH51 312 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 ADIPOR1Q96A54 375 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 ZNF649Q9BS31 505 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 PRR14Q9BWN1 585 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 SLC22A4Q9H015 551 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 ABCB9Q9NP78 766 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 UBQLN4Q9NRR5 601 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 INPP5EQ9NRR6 644 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 FBXO34Q9NWN3 711 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 H2AFY2Q9P0M6 372 aaPredicted RBP15.38■□□□□ 0.05
CPSF4-201ENST00000292476 ZNF223Q9UK11 482 aaPredicted RBP15.38■□□□□ 0.05
CPSF4-201ENST00000292476 SLC7A7Q9UM01 511 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 SLC35A3Q9Y2D2 325 aa15.38■□□□□ 0.05
CPSF4-201ENST00000292476 SEC16AO15027 2179 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 A0A1W2PQL4 384 aaPredicted RBP15.37■□□□□ 0.05
CPSF4-201ENST00000292476 UNC119BA6NIH7 251 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 J3QRE1 110 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 PEX12O00623 359 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 IGHEP01854 428 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 CD53P19397 219 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 GPR4P46093 362 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 CAPZA2P47755 286 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 FABP5Q01469 135 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 FGFBP1Q14512 234 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 CLEC12AQ5QGZ9 265 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 PDZK1Q5T2W1 519 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 FAM131AQ6UXB0 335 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 ZNF517Q6ZMY9 492 aaPredicted RBP15.37■□□□□ 0.05
CPSF4-201ENST00000292476 SHISA6Q6ZSJ9 500 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 LANCL3Q6ZV70 420 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 TMPRSS7Q7RTY8 843 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 CPEB2Q7Z5Q1 589 aaKnown RBP15.37■□□□□ 0.05
CPSF4-201ENST00000292476 RAB43Q86YS6 212 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 OR52L1Q8NGH7 329 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 OR5L2Q8NGL0 311 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 TMEM255BQ8WV15 326 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 GAL3ST4Q96RP7 486 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 ZNF559Q9BR84 538 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 SEMA4CQ9C0C4 833 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 WWTR1Q9GZV5 400 aa15.37■□□□□ 0.05
CPSF4-201ENST00000292476 CCDC187A0A096LP49 1063 aa15.36■□□□□ 0.05
CPSF4-201ENST00000292476 FABP12A6NFH5 140 aa15.36■□□□□ 0.05
CPSF4-201ENST00000292476 NPIPB9F8W1W9 429 aa15.36■□□□□ 0.05
CPSF4-201ENST00000292476 HCN1O60741 890 aa15.36■□□□□ 0.05
CPSF4-201ENST00000292476 MT-CO3P00414 261 aa15.36■□□□□ 0.05
CPSF4-201ENST00000292476 HLA-DQB1P01920 261 aa15.36■□□□□ 0.05
CPSF4-201ENST00000292476 ADH7P40394 386 aa15.36■□□□□ 0.05
CPSF4-201ENST00000292476 HTR3AP46098 478 aa15.36■□□□□ 0.05
CPSF4-201ENST00000292476 RFX2P48378 723 aa15.36■□□□□ 0.05
CPSF4-201ENST00000292476 EFNA3P52797 238 aa15.36■□□□□ 0.05
CPSF4-201ENST00000292476 NRG3P56975 720 aa15.36■□□□□ 0.05
CPSF4-201ENST00000292476 RIN1Q13671 783 aa15.36■□□□□ 0.05
CPSF4-201ENST00000292476 BCL2A1Q16548 175 aa15.36■□□□□ 0.05
CPSF4-201ENST00000292476 FAAH2Q6GMR7 532 aa15.36■□□□□ 0.05
CPSF4-201ENST00000292476 CXXC5Q7LFL8 322 aaKnown RBP15.36■□□□□ 0.05
CPSF4-201ENST00000292476 NRARPQ7Z6K4 114 aa15.36■□□□□ 0.05
CPSF4-201ENST00000292476 CELF2-AS1Q8N7Q2 184 aa15.36■□□□□ 0.05
CPSF4-201ENST00000292476 ZNF614Q8N883 585 aa15.36■□□□□ 0.05
CPSF4-201ENST00000292476 DNAJA4Q8WW22 397 aaPredicted RBP15.36■□□□□ 0.05
CPSF4-201ENST00000292476 PRSS27Q9BQR3 290 aa15.36■□□□□ 0.05
CPSF4-201ENST00000292476 NXF5Q9H1B4 397 aaKnown RBP15.36■□□□□ 0.05
CPSF4-201ENST00000292476 UBQLN3Q9H347 655 aa15.36■□□□□ 0.05
CPSF4-201ENST00000292476 TPK1Q9H3S4 243 aa15.36■□□□□ 0.05
CPSF4-201ENST00000292476 TMEM27Q9HBJ8 222 aa15.36■□□□□ 0.05
CPSF4-201ENST00000292476 RYDENQ9NUL5 291 aaKnown RBP15.36■□□□□ 0.05
CPSF4-201ENST00000292476 TNFRSF10DQ9UBN6 386 aa15.36■□□□□ 0.05
CPSF4-201ENST00000292476 KCNE5Q9UJ90 142 aa15.36■□□□□ 0.05
CPSF4-201ENST00000292476 A0A1W2PQ09 198 aa15.35■□□□□ 0.05
CPSF4-201ENST00000292476 SCDO00767 359 aa15.35■□□□□ 0.05
CPSF4-201ENST00000292476 PIP5K1CO60331 668 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms