RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 WDR5BQ86VZ2 330 aa10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 CNTN4Q8IWV2 1026 aa10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 CYB561A3Q8NBI2 242 aa10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 MICU1Q9BPX6 476 aa10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 G6PC3Q9BUM1 346 aa10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 NARFLQ9H6Q4 476 aa10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 BTNL2Q9UIR0 455 aa10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 MICAL3Q7RTP6 2002 aa10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 IGHA2P01877 340 aa10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 P04436 131 aa10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 CCR7P32248 378 aa10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 CCR6P51684 374 aa10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 FOXC1Q12948 553 aa10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 FXNQ16595 210 aa10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 TP53I3Q53FA7 332 aa10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 NUP54Q7Z3B4 507 aa10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 OR6V1Q8N148 313 aa10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 OR4F15Q8NGB8 312 aa10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 DUSP19Q8WTR2 217 aa10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 SMAP2Q8WU79 429 aaPredicted RBP10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 FER1L6-AS2Q96M78 137 aa10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 AP1S3Q96PC3 154 aa10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 FGF22Q9HCT0 170 aa10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 ZNF226Q9NYT6 803 aa10.59□□□□□ -0.71
NPC1L1-201ENST00000289547 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 HCKP08631 526 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 GIPRP48546 466 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 VEGFCP49767 419 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 RNF144AP50876 292 aaPredicted RBP10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 EXOSC2Q13868 293 aaKnown RBP10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 PYCR3Q53H96 274 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 LRRC25Q8N386 305 aaPredicted RBP10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 OR2T11Q8NH01 316 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 SCARB1Q8WTV0 552 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 DUS3LQ96G46 650 aaKnown RBP10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 C10orf90Q96M02 699 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 CPPED1Q9BRF8 314 aaPredicted RBP10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 SLC25A18Q9H1K4 315 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 CLMPQ9H6B4 373 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 J3KTA2 159 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 RTCAO00442 366 aaKnown RBP10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 IL1RNP18510 177 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 PPT1P50897 306 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 PER3P56645 1201 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 STARD6P59095 220 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 GNMTQ14749 295 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 CTF1Q16619 201 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 OR2AJ1Q8NGZ0 328 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 NANPQ8TBE9 248 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 ECHDC3Q96DC8 303 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 MSLNLQ96KJ4 702 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 OR6C1Q96RD1 312 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 CNN2Q99439 309 aaKnown RBP10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 NKX6-2Q9C056 277 aaPredicted RBP10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 CUTCQ9NTM9 273 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 URB1O60287 2271 aaKnown RBP10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 A0A0A6YYH2 397 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 A6NJ64 397 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 CR2P20023 1033 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 BDKRB2P30411 391 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 GABRA5P31644 462 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 GDNFP39905 211 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 BTG1P62324 171 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 CHRNEQ04844 493 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 PTPRRQ15256 657 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 SLC51BQ86UW2 128 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 SIAH3Q8IW03 269 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 ISL2Q96A47 359 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 FAM122AQ96E09 287 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 TEX37Q96LM6 180 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 MBOAT4Q96T53 435 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 TCEAL2Q9H3H9 227 aaPredicted RBP10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 SRA1Q9HD15 236 aaKnown RBP10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 BABAM2Q9NXR7 383 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 PADI1Q9ULC6 663 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 TTC3P53804 2025 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 POM121BA6NF01 834 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 OR7A17O14581 309 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 YY2O15391 372 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 KCNK2O95069 426 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 ADRB1P08588 477 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 MECP2P51608 486 aaKnown RBP10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 MRPS10P82664 201 aaKnown RBP10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 IGSF11Q5DX21 431 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 ALKBH2Q6NS38 261 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 RPL13AP3Q6NVV1 102 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 TMEM92Q6UXU6 159 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 IL17RDQ8NFM7 739 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 UBXN10Q96LJ8 280 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 F2RL3Q96RI0 385 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 ACPTQ9BZG2 426 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 PARPBPQ9NWS1 579 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 ZMAT5Q9UDW3 170 aaKnown RBP10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 PRSS21Q9Y6M0 314 aa10.58□□□□□ -0.72
NPC1L1-201ENST00000289547 TRAV20A0A0B4J274 112 aa10.57□□□□□ -0.72
NPC1L1-201ENST00000289547 CCDC163A0A0D9SF12 145 aa10.57□□□□□ -0.72
NPC1L1-201ENST00000289547 A0A0D9SG52 128 aa10.57□□□□□ -0.72
NPC1L1-201ENST00000289547 VSTM5A8MXK1 200 aa10.57□□□□□ -0.72
NPC1L1-201ENST00000289547 RD3LP0DJH9 198 aa10.57□□□□□ -0.72
NPC1L1-201ENST00000289547 GLB1P16278 677 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms