RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 MARCH9Q86YJ5 346 aa16.38■□□□□ 0.21
CAPN1-201ENST00000279247 CMIPQ8IY22 773 aa16.38■□□□□ 0.21
CAPN1-201ENST00000279247 OR14A16Q8NHC5 309 aa16.38■□□□□ 0.21
CAPN1-201ENST00000279247 IFI44Q8TCB0 444 aa16.38■□□□□ 0.21
CAPN1-201ENST00000279247 Q96M85 177 aa16.38■□□□□ 0.21
CAPN1-201ENST00000279247 C11orf98E9PRG8 122 aa16.38■□□□□ 0.21
CAPN1-201ENST00000279247 AKAP8O43823 692 aaKnown RBP16.38■□□□□ 0.21
CAPN1-201ENST00000279247 SULT1C4O75897 302 aa16.38■□□□□ 0.21
CAPN1-201ENST00000279247 IFNGP01579 166 aa16.38■□□□□ 0.21
CAPN1-201ENST00000279247 RORCP51449 518 aa16.38■□□□□ 0.21
CAPN1-201ENST00000279247 OR12D2P58182 307 aa16.38■□□□□ 0.21
CAPN1-201ENST00000279247 LINC00114Q6XXX2 140 aa16.38■□□□□ 0.21
CAPN1-201ENST00000279247 SMPDL3BQ92485 455 aa16.38■□□□□ 0.21
CAPN1-201ENST00000279247 KCTD7Q96MP8 289 aa16.38■□□□□ 0.21
CAPN1-201ENST00000279247 SMURF1Q9HCE7 757 aa16.38■□□□□ 0.21
CAPN1-201ENST00000279247 ASB6Q9NWX5 421 aa16.38■□□□□ 0.21
CAPN1-201ENST00000279247 SUSD2Q9UGT4 822 aa16.38■□□□□ 0.21
CAPN1-201ENST00000279247 MRTO4Q9UKD2 239 aaKnown RBP16.38■□□□□ 0.21
CAPN1-201ENST00000279247 TEX13CA0A0J9YWL9 993 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 ZNF354AO60765 605 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-201ENST00000279247 ZNF12P17014 697 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 PPP5CP53041 499 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 ACY1Q03154 408 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 TMEM44Q2T9K0 475 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 RHBDD2Q6NTF9 364 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 SLC22A16Q86VW1 577 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 DUSP19Q8WTR2 217 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 C4orf36Q96KX1 117 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 ZNF649Q9BS31 505 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 EXOGQ9Y2C4 368 aaKnown RBP16.37■□□□□ 0.21
CAPN1-201ENST00000279247 SLC22A31A6NKX4 558 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 TP53I3Q53FA7 332 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 KMT5CQ86Y97 462 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 PRMT8Q9NR22 394 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-201ENST00000279247 TEX51A0A1B0GUA7 166 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 A0A1W2PPK0 400 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 A0A1W2PQL4 384 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-201ENST00000279247 PLGP00747 810 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-201ENST00000279247 SBK2P0C263 348 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 PYCR1P32322 319 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 TPBGQ13641 420 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 CARTPTQ16568 116 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 ZMAT1Q5H9K5 638 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 FAM27D1Q5T7N8 215 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 RNLSQ5VYX0 342 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 BICRALQ6AI39 1079 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 ARHGAP11AQ6P4F7 1023 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 TMPRSS11AQ6ZMR5 421 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 KANSL1Q7Z3B3 1105 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 METTL21AQ8WXB1 218 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 HOXD1Q9GZZ0 328 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 SRPK3Q9UPE1 567 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 SF3B6Q9Y3B4 125 aaKnown RBP16.37■□□□□ 0.21
CAPN1-201ENST00000279247 PEX16Q9Y5Y5 336 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 DMXL1Q9Y485 3027 aa16.37■□□□□ 0.21
CAPN1-201ENST00000279247 URB1O60287 2271 aaKnown RBP16.36■□□□□ 0.21
CAPN1-201ENST00000279247 CCDC182A6NF36 153 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 LOC110117498-PIK3R3F6TDL0 507 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 IGHA1P01876 353 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 HNRNPCP07910 306 aaKnown RBP eCLIP16.36■□□□□ 0.21
CAPN1-201ENST00000279247 MSL3P1P0C860 447 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 TNFSF8P32971 234 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 GALNSP34059 522 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 FBXW4P57775 412 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 EGR4Q05215 589 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 FNDC7Q5VTL7 733 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.36■□□□□ 0.21
CAPN1-201ENST00000279247 POC5Q8NA72 575 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 GALNT9Q9HCQ5 603 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 PALMDQ9NP74 551 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 MALT1Q9UDY8 824 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 OR7A10O76100 309 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 ENDOUP21128 410 aaKnown RBP16.36■□□□□ 0.21
CAPN1-201ENST00000279247 AHCYP23526 432 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 E2F1Q01094 437 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 STEAP3Q658P3 488 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 ATG4DQ86TL0 474 aaPredicted RBP16.36■□□□□ 0.21
CAPN1-201ENST00000279247 PPP1R3BQ86XI6 285 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 OR8H2Q8N162 312 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 CARFQ8N187 725 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 ZNF485Q8NCK3 441 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 FOXN4Q96NZ1 517 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 ADGRL4Q9HBW9 690 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 RPRD1BQ9NQG5 326 aaKnown RBP16.36■□□□□ 0.21
CAPN1-201ENST00000279247 COMMD3Q9UBI1 195 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 CHRNA9Q9UGM1 479 aa16.36■□□□□ 0.21
CAPN1-201ENST00000279247 OR6C68A6NDL8 312 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 CXCR1P25024 350 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 GABRA5P31644 462 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 CTXN1P60606 82 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 RNF4P78317 190 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 LTBQ06643 244 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 LEG1Q6P5S2 330 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 PAPD4Q6PIY7 484 aaKnown RBP16.35■□□□□ 0.21
CAPN1-201ENST00000279247 WDR5BQ86VZ2 330 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 NEIL3Q8TAT5 605 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 CHPT1Q8WUD6 406 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 SRA1Q9HD15 236 aaKnown RBP16.35■□□□□ 0.21
CAPN1-201ENST00000279247 ABCB9Q9NP78 766 aa16.35■□□□□ 0.21
CAPN1-201ENST00000279247 ETAA1Q9NY74 926 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms