RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 VRK1Q99986 396 aaPredicted RBP11.42□□□□□ -0.58
USP30-201ENST00000257548 CCDC3Q9BQI4 270 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 C20orf24Q9BUV8 137 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 RPS10P5Q9NQ39 176 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 KIF25Q9UIL4 384 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 C7orf66A4D0T2 115 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 AIPO00170 330 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 SUSD5O60279 629 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 HLA-AP01891 365 aaKnown RBP11.42□□□□□ -0.58
USP30-201ENST00000257548 SRMP19623 302 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 PRSS3P35030 304 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 USF2Q15853 346 aaPredicted RBP11.42□□□□□ -0.58
USP30-201ENST00000257548 ARHGAP40Q5TG30 622 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 NPAS4Q8IUM7 802 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 STEAP2Q8NFT2 490 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 LILRB1Q8NHL6 650 aaPredicted RBP11.42□□□□□ -0.58
USP30-201ENST00000257548 FAM46BQ96A09 425 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 ZNF707Q96C28 371 aaPredicted RBP11.42□□□□□ -0.58
USP30-201ENST00000257548 LMLNQ96KR4 655 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 NMNAT3Q96T66 252 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 ELL3Q9HB65 397 aaPredicted RBP11.42□□□□□ -0.58
USP30-201ENST00000257548 UPB1Q9UBR1 384 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 ADAM18Q9Y3Q7 739 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 OR1A2Q9Y585 309 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 SPACA6W5XKT8 324 aa11.42□□□□□ -0.58
USP30-201ENST00000257548 H7C1C5 153 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 FOXE1O00358 373 aaPredicted RBP11.41□□□□□ -0.58
USP30-201ENST00000257548 FBXO24O75426 580 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 PRH1P02810 166 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 SLC6A6P31641 620 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 IRS1P35568 1242 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 PBX2P40425 430 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 LSSP48449 732 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 VASPP50552 380 aaPredicted RBP11.41□□□□□ -0.58
USP30-201ENST00000257548 PGDP52209 483 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 LCN6P62502 163 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 KIAA1211LQ6NV74 962 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 ZNF227Q86WZ6 799 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 BVESQ8NE79 360 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 KCNJ15Q99712 375 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 FKRPQ9H9S5 495 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 FBXO4Q9UKT5 387 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 TRAPPC13A5PLN9 417 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 WASH3PC4AMC7 463 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 HOXA2O43364 376 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 GIPP09681 153 aaPredicted RBP11.41□□□□□ -0.58
USP30-201ENST00000257548 ALG10BQ5I7T1 473 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 SMIM4Q8WVI0 70 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 HSD17B8Q92506 261 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 TSSK2Q96PF2 358 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 MCOLN1Q9GZU1 580 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 ENKD1Q9H0I2 346 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 SYT4Q9H2B2 425 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 METTL8Q9H825 291 aaKnown RBP11.41□□□□□ -0.58
USP30-201ENST00000257548 ZNF334Q9HCZ1 680 aaPredicted RBP11.41□□□□□ -0.58
USP30-201ENST00000257548 C20orf141Q9NUB4 165 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 SLCO1C1Q9NYB5 712 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 LIPT1Q9Y234 373 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 SCN2AQ99250 2005 aa11.41□□□□□ -0.58
USP30-201ENST00000257548 TMEM72A0PK05 275 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 SELENOFO60613 162 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 C8AP07357 584 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 PTBP1P26599 531 aaKnown RBP eCLIP11.4□□□□□ -0.58
USP30-201ENST00000257548 OPRD1P41143 372 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 NRG3P56975 720 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 LTBQ06643 244 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 GFOD2Q3B7J2 385 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 NIPAL3Q6P499 406 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 TMEM71Q6P5X7 295 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 TEX19Q8NA77 164 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 TMIEQ8NEW7 156 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 OR2A12Q8NGT7 310 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 LDAHQ9H6V9 325 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 SLC6A5Q9Y345 797 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 INSL5Q9Y5Q6 135 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 NPFFR2Q9Y5X5 522 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 TP53BP1Q12888 1972 aaPredicted RBP11.4□□□□□ -0.58
USP30-201ENST00000257548 C1orf196B1AJZ1 125 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 SLC31A1O15431 190 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 LDB3O75112 727 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 DBIP07108 87 aaKnown RBP11.4□□□□□ -0.58
USP30-201ENST00000257548 SNRNP70P08621 437 aaKnown RBP11.4□□□□□ -0.58
USP30-201ENST00000257548 ZNF28P17035 718 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 HMGA1P17096 107 aaKnown RBP11.4□□□□□ -0.58
USP30-201ENST00000257548 SNRPEP62304 92 aaKnown RBP11.4□□□□□ -0.58
USP30-201ENST00000257548 RBMS2Q15434 407 aaKnown RBP11.4□□□□□ -0.58
USP30-201ENST00000257548 TRAM1Q15629 374 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 MAPK14Q16539 360 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 MRPL2Q5T653 305 aaKnown RBP11.4□□□□□ -0.58
USP30-201ENST00000257548 SLC35F2Q8IXU6 374 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 PM20D2Q8IYS1 436 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 BCL7CQ8WUZ0 217 aaPredicted RBP11.4□□□□□ -0.58
USP30-201ENST00000257548 TMED6Q8WW62 240 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 SUSD6Q92537 303 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 DCUN1D4Q92564 292 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 SLC25A36Q96CQ1 311 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 GAS2L1Q99501 681 aaPredicted RBP11.4□□□□□ -0.58
USP30-201ENST00000257548 CHRDQ9H2X0 955 aa11.4□□□□□ -0.58
USP30-201ENST00000257548 HMX1Q9NP08 348 aaPredicted RBP11.4□□□□□ -0.58
USP30-201ENST00000257548 EMC3Q9P0I2 261 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms