RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 UGT2B10P36537 528 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 BCAP31P51572 246 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 RPS3AP61247 264 aaKnown RBP17.19■□□□□ 0.34
TRIM47-201ENST00000254816 EGR4Q05215 589 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 COL28A1Q2UY09 1125 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 ZNF404Q494X3 552 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 TMEM164Q5U3C3 297 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 PPP1R32Q7Z5V6 425 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 SLC22A8Q8TCC7 542 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 RELTQ969Z4 430 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 ADAM19Q9H013 955 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 PCDHGA3Q9Y5H0 932 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 DMXL1Q9Y485 3027 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 METTL15A6NJ78 407 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 LRP3O75074 770 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 PGCP20142 388 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 F8A1P23610 371 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 SOX3P41225 446 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 QPRTQ15274 297 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 EXT1Q16394 746 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 NDUFAF7Q7L592 441 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 NUP54Q7Z3B4 507 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 ANKK1Q8NFD2 765 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 GPR119Q8TDV5 335 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 MGLLQ99685 303 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 PRRG3Q9BZD7 231 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 POLE4Q9NR33 117 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 KLRF1Q9NZS2 232 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 CLEC2DQ9UHP7 191 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 FAM183AA6NL82 134 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 TNFSF15O95150 251 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 APOL3O95236 402 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 PPP1R3DO95685 299 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 NAGAP17050 411 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 TUBA1BP68363 451 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 EIF3IQ13347 325 aaKnown RBP17.18■□□□□ 0.34
TRIM47-201ENST00000254816 DNASE1L3Q13609 305 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 OXA1LQ15070 435 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 SLC25A30Q5SVS4 291 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 TUBA1AQ71U36 451 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 BBS1Q8NFJ9 593 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 M1APQ8TC57 530 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 OTULINQ96BN8 352 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 PPP1R14BQ96C90 147 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 DACH2Q96NX9 599 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 TEX12Q9BXU0 123 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 MMP25Q9NPA2 562 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 MED11Q9P086 117 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 RPL36Q9Y3U8 105 aaKnown RBP17.18■□□□□ 0.34
TRIM47-201ENST00000254816 FBXO45P0C2W1 286 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 SLC9A3P48764 834 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 GAS1P54826 345 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 MEDAGQ5VYS4 303 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 C10orf53Q8N6V4 93 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 C9orf43Q8TAL5 461 aaPredicted RBP17.18■□□□□ 0.34
TRIM47-201ENST00000254816 KTI12Q96EK9 354 aaPredicted RBP17.18■□□□□ 0.34
TRIM47-201ENST00000254816 MOGAT1Q96PD6 335 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 NPAS1Q99742 590 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 MROQ9BYG7 248 aa17.18■□□□□ 0.34
TRIM47-201ENST00000254816 OR7A10O76100 309 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 DKK1O94907 266 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 RAB40ALP0C0E4 278 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 GP1BBP13224 206 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 ENDOUP21128 410 aaKnown RBP17.17■□□□□ 0.34
TRIM47-201ENST00000254816 TMED10P49755 219 aaKnown RBP17.17■□□□□ 0.34
TRIM47-201ENST00000254816 FOXK2Q01167 660 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 RPL13AP3Q6NVV1 102 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 GLRX5Q86SX6 157 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 CYP4Z2PQ8N1L4 340 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 LNX2Q8N448 690 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 SPACA9Q96E40 222 aaPredicted RBP17.17■□□□□ 0.34
TRIM47-201ENST00000254816 CDCP1Q9H5V8 836 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 MED20Q9H944 212 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 HINT3Q9NQE9 182 aaKnown RBP17.17■□□□□ 0.34
TRIM47-201ENST00000254816 KDM4EB2RXH2 506 aaPredicted RBP17.17■□□□□ 0.34
TRIM47-201ENST00000254816 IGHEP01854 428 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 HMGN1P05114 100 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 CD63P08962 238 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 FTH1P19P0C7X4 201 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 CXCR1P25024 350 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 CD40LGP29965 261 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 PTGDSP41222 190 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 RPS15P62841 145 aaKnown RBP17.17■□□□□ 0.34
TRIM47-201ENST00000254816 C17orf67Q0P5P2 114 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 INPP5JQ15735 1006 aaPredicted RBP17.17■□□□□ 0.34
TRIM47-201ENST00000254816 SSX1Q16384 188 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 NTRK2Q16620 822 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 IL20RBQ6UXL0 311 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 CPOQ8IVL8 374 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 KBTBD8Q8NFY9 601 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 TTC9Q92623 222 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 TMEM43Q9BTV4 400 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 CDADC1Q9BWV3 514 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 MMP27Q9H306 513 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 METTL7AQ9H8H3 244 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 TAS2R10Q9NYW0 307 aa17.17■□□□□ 0.34
TRIM47-201ENST00000254816 MRPS18BQ9Y676 258 aaKnown RBP17.17■□□□□ 0.34
TRIM47-201ENST00000254816 PRODHO43272 600 aa17.16■□□□□ 0.34
TRIM47-201ENST00000254816 PIPP12273 146 aaPredicted RBP17.16■□□□□ 0.34
TRIM47-201ENST00000254816 DLSTP36957 453 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms