RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 SgtbQ8VD33 304 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Olfr1487Q8VFQ6 315 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Znf524Q9D0B1 321 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 2200002D01RikQ9D809 114 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 1700086D15RikQ9D9E9 151 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Scn8aQ9WTU3 1978 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Papss2O88428 621 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Il1bP10749 269 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Lin28bQ45KJ6 247 aaKnown RBP10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Olfr1094Q8VF13 330 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Rnf128Q9D304 428 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Gpn3Q9D3W4 284 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Upk3aQ9JKX8 287 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Olfr1056A2AVY0 313 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Gm8374L7N2A9 172 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Btg1P62325 171 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Arntl2Q2VPD4 579 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Ankrd37Q569N2 159 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Grm7Q68ED2 915 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Zfp180Q6NZI9 655 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Lrrtm4Q80XG9 590 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Trmt12Q8BG71 446 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Tmem30aQ8VEK0 364 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Dusp12Q9D0T2 339 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Actr6Q9D864 396 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 March7Q9WV66 693 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Olfr1082A0A1L1SUC9 313 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Gm364A2AFI6 671 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Olfr1206A2ATJ9 307 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Olfr1255A2AUA4 310 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Gm572B1ARY8 399 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 1700014D04RikJ3QMS2 983 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Psmd4O35226 376 aaKnown RBP10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Bcl2a1dO55179 172 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Il1r1P13504 576 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Csf2rb2P26954 878 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Prdx1P35700 199 aaKnown RBP10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Rce1P57791 329 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Stx4P70452 298 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Mtcp1Q60945 107 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Olfr1225Q7TR01 311 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Tmprss11gQ8BZ10 417 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Rbm48Q8K2X2 371 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Grhl2Q8K5C0 625 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Cacnb4Q8R0S4 519 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Rhbdl1Q8VC82 373 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Ferd3lQ923Z4 168 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Necab3Q9D6J4 353 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Slc22a17Q9D9E0 401 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Vmn1r65Q9EPS7 332 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Slc7a9Q9QXA6 487 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 PlpbpQ9Z2Y8 274 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Irs2P81122 1321 aa10.55□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Fam84bD3YXJ5 310 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Gm10269G3UWD7 123 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Bcl2l11O54918 196 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Tnfaip1O70479 316 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 ErgP81270 486 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 ptchd1Q14B62 888 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 EnkurQ6SP97 255 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Sec22aQ8BH47 307 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 PcgF3Q8BTQ0 241 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Slc25a42Q8R0Y8 318 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Mrgpra5Q91ZC7 304 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Clint1Q99KN9 631 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Hint3Q9CPS6 165 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Sult1c2Q9D939 296 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Tp73Q9JJP2 631 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Ak4Q9WUR9 223 aaKnown RBP10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 TrdcA0A0G2JEU3 153 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Slc30a4O35149 430 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Mc3rP33033 323 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Nkx2-6P43688 289 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Ddx6P54823 483 aaKnown RBP10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Cd34Q64314 382 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Slc22a13Q6A4L0 551 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Tas2r135Q7TQA9 312 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Hs6st2Q80UW0 612 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Shc2Q8BMC3 573 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 GmdsQ8K0C9 372 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Pcdhga3Q91XY5 928 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Olfr459Q924H8 314 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Tmem51Q99LG1 249 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Bex4Q9CWT2 118 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Vmn1r56Q9EPS9 310 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Gm21117A0A087WPJ9 222 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Gm20820A0A087WPP3 222 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Gm20937A0A087WQA3 222 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Gm21258A0A087WQC7 222 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Gm21095A0A087WR14 222 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Gm20824A0A087WS97 222 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Gm29866A0A0A6YX04 222 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Gm14399A2ARW8 610 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 ArafP04627 604 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Fgf9P54130 208 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Gal3st3P61315 431 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Tnfaip3Q60769 775 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Guk1Q64520 198 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Ablim3Q69ZX8 682 aa10.54□□□□□ -0.72
Topbp1-201ENSMUST00000035164 Lrp10Q7TQH7 713 aa10.54□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 64.6 ms