RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 MMP25Q9NPA2 562 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 ASF1BQ9NVP2 202 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 RFXAPO00287 272 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 GPR32O75388 356 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 CYBBP04839 570 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 CSF3P09919 207 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 CETPP11597 493 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 GGT1P19440 569 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 AOC1P19801 751 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 EFNA1P20827 205 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 PXNP49023 591 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 CCL7P80098 99 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 SLBPQ14493 270 aaKnown RBP eCLIP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 B3GNTL1Q67FW5 361 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 Q6ZPB1 254 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 RNF44Q7L0R7 432 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 HMGB4Q8WW32 186 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 BCL2L2Q92843 193 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 SLC5A5Q92911 643 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 EAF2Q96CJ1 260 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 TMEM209Q96SK2 561 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 ARHGDIGQ99819 225 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 NUDT5Q9UKK9 219 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 LAMB4A4D0S4 1761 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 PRAMEF33A0A0G2JMD5 474 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 PRAMEF10O60809 474 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 WDR1O75083 606 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 CST4P01036 141 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 F11P03951 625 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 PNLIPP16233 465 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 CRHR2Q13324 411 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 LDLRAD2Q5SZI1 272 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 KIAA1211LQ6NV74 962 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 OR2M7Q8NG81 312 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 SHKBP1Q8TBC3 707 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 STYXQ8WUJ0 223 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 KISS1RQ969F8 398 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 TBX5Q99593 518 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 AGPAT4Q9NRZ5 378 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 ZNF391Q9UJN7 358 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 RPS10-NUDT3A0A1W2PQS6 291 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 C17orf102A2RUQ5 167 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 ZNF264O43296 627 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 PRKAB2O43741 272 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 SOX15O60248 233 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 CLEC3AO75596 197 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 SLC2A2P11168 524 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 AK4P27144 223 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 AQP2P41181 271 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 ZNF234Q14588 700 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 CHADLQ6NUI6 762 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 LRRC52Q8N7C0 313 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 RGP1Q92546 391 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 TOMM40LQ969M1 308 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 PINX1Q96BK5 328 aaKnown RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 ROPN1LQ96C74 230 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 TEPSINQ96N21 525 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 TP53RKQ96S44 253 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 EPB41L4BQ9H329 900 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 ADGBQ8N7X0 1667 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 GBAP04062 536 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 ARG1P05089 322 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 SLC6A12P48065 614 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 MS4A2Q01362 244 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 EN1Q05925 392 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 DPY19L1Q2PZI1 675 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 ARHGAP15Q53QZ3 475 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 ZNF789Q5FWF6 425 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 NSUN5P2Q63ZY6 315 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 RNF165Q6ZSG1 346 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 RYBPQ8N488 228 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 FBXO36Q8NEA4 188 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 DGAT2Q96PD7 388 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 TGM7Q96PF1 710 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 PDCD2LQ9BRP1 358 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 STRADBQ9C0K7 418 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 TKTL2Q9H0I9 626 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 SLC25A32Q9H2D1 315 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 ZNF552Q9H707 407 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 WDR54Q9H977 334 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 NDRG4Q9ULP0 352 aaKnown RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 GLOD5A6NK44 160 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 LIPT2A6NK58 231 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 ZNF99A8MXY4 864 aaPredicted RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 BLOC1S5-TXNDC5H3BN57 136 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 CDC14BO60729 498 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 ABCA8O94911 1581 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 CXCL14O95715 111 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 ALDOAP04075 364 aaKnown RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 PRKCGP05129 697 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 PCMT1P22061 227 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 IFITM3Q01628 133 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 HIF1AQ16665 826 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 CDO1Q16878 200 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 MBNL2Q5VZF2 373 aaKnown RBP4.01□□□□□ -1.77
SCN3A-209ENST00000639244 CYS1Q717R9 158 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 C1orf210Q8IVY1 113 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 KMT2EQ8IZD2 1858 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 ST6GALNAC3Q8NDV1 305 aa4.01□□□□□ -1.77
SCN3A-209ENST00000639244 OR8D4Q8NGM9 314 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms