RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 ATAD3AQ9NVI7 634 aa17.53■□□□□ 0.4
TARDBP-228ENST00000629725 OXSMQ9NWU1 459 aa17.53■□□□□ 0.4
TARDBP-228ENST00000629725 TMEM181Q9P2C4 612 aa17.53■□□□□ 0.4
TARDBP-228ENST00000629725 MKLN1Q9UL63 735 aa17.53■□□□□ 0.4
TARDBP-228ENST00000629725 FLVCR1Q9Y5Y0 555 aa17.53■□□□□ 0.4
TARDBP-228ENST00000629725 A0A0A6YYJ9 748 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 IGHV1-18A0A0C4DH31 117 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 SLCO1B7G3V0H7 640 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 KCNAB3O43448 404 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 LILRA1O75019 489 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 PDE5AO76074 875 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 VENTXO95231 258 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 PROCP04070 461 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 DAOP14920 347 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 EGR1P18146 543 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 IDH3GP51553 393 aaPredicted RBP17.52■□□□□ 0.4
TARDBP-228ENST00000629725 EFNB3Q15768 340 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 ADIPOQQ15848 244 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 CCDC153Q494R4 210 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 HIKESHIQ53FT3 197 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 RINLQ6ZS11 566 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 GRINAQ7Z429 371 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 NATD1Q8N6N6 113 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 SGMS2Q8NHU3 365 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 SLC38A2Q96QD8 506 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 SNX18Q96RF0 628 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 PLK3Q9H4B4 646 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 TBK1Q9UHD2 729 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 TRAPPC4Q9Y296 219 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 DNAJC15Q9Y5T4 150 aa17.52■□□□□ 0.4
TARDBP-228ENST00000629725 PKD1L1Q8TDX9 2849 aa17.52■□□□□ 0.39
TARDBP-228ENST00000629725 DUXAA6NLW8 204 aa17.51■□□□□ 0.39
TARDBP-228ENST00000629725 CFLARO15519 480 aa17.51■□□□□ 0.39
TARDBP-228ENST00000629725 EIF1BO60739 113 aaKnown RBP17.51■□□□□ 0.39
TARDBP-228ENST00000629725 AK1P00568 194 aa17.51■□□□□ 0.39
TARDBP-228ENST00000629725 CRYAAP02489 173 aa17.51■□□□□ 0.39
TARDBP-228ENST00000629725 RYKP34925 604 aa17.51■□□□□ 0.39
TARDBP-228ENST00000629725 PGM1P36871 562 aa17.51■□□□□ 0.39
TARDBP-228ENST00000629725 CDH15P55291 814 aa17.51■□□□□ 0.39
TARDBP-228ENST00000629725 RPS26P62854 115 aaKnown RBP17.51■□□□□ 0.39
TARDBP-228ENST00000629725 VHLLQ6RSH7 139 aa17.51■□□□□ 0.39
TARDBP-228ENST00000629725 UGT2A3Q6UWM9 527 aa17.51■□□□□ 0.39
TARDBP-228ENST00000629725 ADGRG3Q86Y34 549 aa17.51■□□□□ 0.39
TARDBP-228ENST00000629725 MZB1Q8WU39 189 aa17.51■□□□□ 0.39
TARDBP-228ENST00000629725 NAA11Q9BSU3 229 aaPredicted RBP17.51■□□□□ 0.39
TARDBP-228ENST00000629725 KATNB1Q9BVA0 655 aa17.51■□□□□ 0.39
TARDBP-228ENST00000629725 OBP2BQ9NPH6 170 aa17.51■□□□□ 0.39
TARDBP-228ENST00000629725 PSMC3IPQ9P2W1 217 aaPredicted RBP17.51■□□□□ 0.39
TARDBP-228ENST00000629725 FBXO9Q9UK97 447 aaPredicted RBP17.51■□□□□ 0.39
TARDBP-228ENST00000629725 ERCC1P07992 297 aaPredicted RBP17.5■□□□□ 0.39
TARDBP-228ENST00000629725 CCNA2P20248 432 aa17.5■□□□□ 0.39
TARDBP-228ENST00000629725 MATN1P21941 496 aa17.5■□□□□ 0.39
TARDBP-228ENST00000629725 PCMT1P22061 227 aa17.5■□□□□ 0.39
TARDBP-228ENST00000629725 MAPK1P28482 360 aa17.5■□□□□ 0.39
TARDBP-228ENST00000629725 ACTG1P63261 375 aa17.5■□□□□ 0.39
TARDBP-228ENST00000629725 SLC35A1P78382 337 aa17.5■□□□□ 0.39
TARDBP-228ENST00000629725 PTGR1Q14914 329 aa17.5■□□□□ 0.39
TARDBP-228ENST00000629725 SLC17A1Q14916 467 aa17.5■□□□□ 0.39
TARDBP-228ENST00000629725 ARHGAP11BQ3KRB8 267 aa17.5■□□□□ 0.39
TARDBP-228ENST00000629725 KANK2Q63ZY3 851 aa17.5■□□□□ 0.39
TARDBP-228ENST00000629725 OLIG3Q7RTU3 272 aa17.5■□□□□ 0.39
TARDBP-228ENST00000629725 DDIASQ8IXT1 998 aa17.5■□□□□ 0.39
TARDBP-228ENST00000629725 C3orf56Q8N813 242 aa17.5■□□□□ 0.39
TARDBP-228ENST00000629725 CCDC63Q8NA47 563 aa17.5■□□□□ 0.39
TARDBP-228ENST00000629725 FAM71CQ8NEG0 241 aa17.5■□□□□ 0.39
TARDBP-228ENST00000629725 SEMA6DQ8NFY4 1073 aa17.5■□□□□ 0.39
TARDBP-228ENST00000629725 BOD1Q96IK1 185 aa17.5■□□□□ 0.39
TARDBP-228ENST00000629725 ZNF350Q9GZX5 532 aa17.5■□□□□ 0.39
TARDBP-228ENST00000629725 SLC35A3Q9Y2D2 325 aa17.5■□□□□ 0.39
TARDBP-228ENST00000629725 PCDHB14Q9Y5E9 798 aa17.5■□□□□ 0.39
TARDBP-228ENST00000629725 A0A1W2PPM1 405 aa17.49■□□□□ 0.39
TARDBP-228ENST00000629725 PLIN3O60664 434 aa17.49■□□□□ 0.39
TARDBP-228ENST00000629725 CPA3P15088 417 aa17.49■□□□□ 0.39
TARDBP-228ENST00000629725 SOAT1P35610 550 aa17.49■□□□□ 0.39
TARDBP-228ENST00000629725 SLC1A3P43003 542 aa17.49■□□□□ 0.39
TARDBP-228ENST00000629725 COMPP49747 757 aaPredicted RBP17.49■□□□□ 0.39
TARDBP-228ENST00000629725 DVL1P1P54792 670 aaPredicted RBP17.49■□□□□ 0.39
TARDBP-228ENST00000629725 MAPK14Q16539 360 aa17.49■□□□□ 0.39
TARDBP-228ENST00000629725 C16orf62Q7Z3J2 963 aa17.49■□□□□ 0.39
TARDBP-228ENST00000629725 ABHD12BQ7Z5M8 362 aaPredicted RBP17.49■□□□□ 0.39
TARDBP-228ENST00000629725 CNPY4Q8N129 248 aa17.49■□□□□ 0.39
TARDBP-228ENST00000629725 POMGNT2Q8NAT1 580 aa17.49■□□□□ 0.39
TARDBP-228ENST00000629725 MNS1Q8NEH6 495 aa17.49■□□□□ 0.39
TARDBP-228ENST00000629725 NEU4Q8WWR8 484 aaPredicted RBP17.49■□□□□ 0.39
TARDBP-228ENST00000629725 PRPF18Q99633 342 aaKnown RBP17.49■□□□□ 0.39
TARDBP-228ENST00000629725 SERHL2Q9H4I8 314 aa17.49■□□□□ 0.39
TARDBP-228ENST00000629725 METTL17Q9H7H0 456 aaPredicted RBP17.49■□□□□ 0.39
TARDBP-228ENST00000629725 RIPK2O43353 540 aa17.48■□□□□ 0.39
TARDBP-228ENST00000629725 BCAS1O75363 584 aaPredicted RBP17.48■□□□□ 0.39
TARDBP-228ENST00000629725 LYPLA1O75608 230 aaPredicted RBP17.48■□□□□ 0.39
TARDBP-228ENST00000629725 PAX7P23759 505 aa17.48■□□□□ 0.39
TARDBP-228ENST00000629725 CCT5P48643 541 aa17.48■□□□□ 0.39
TARDBP-228ENST00000629725 HBA1P69905 142 aa17.48■□□□□ 0.39
TARDBP-228ENST00000629725 EMBQ6PCB8 327 aa17.48■□□□□ 0.39
TARDBP-228ENST00000629725 DEF8Q6ZN54 512 aa17.48■□□□□ 0.39
TARDBP-228ENST00000629725 C6orf120Q7Z4R8 191 aa17.48■□□□□ 0.39
TARDBP-228ENST00000629725 ZNF786Q8N393 782 aa17.48■□□□□ 0.39
TARDBP-228ENST00000629725 TWIST2Q8WVJ9 160 aa17.48■□□□□ 0.39
TARDBP-228ENST00000629725 TMEM45BQ96B21 275 aa17.48■□□□□ 0.39
TARDBP-228ENST00000629725 DDIT4LQ96D03 193 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms