RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 ASB6Q9NWX5 421 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 PRSS50Q9UI38 385 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 OSGIN1Q9UJX0 560 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 MGAT4BQ9UQ53 548 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 LAMP3Q9UQV4 416 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 TMED7Q9Y3B3 224 aa8.56□□□□□ -1.04
TARDBP-218ENST00000617172 ZNF469Q96JG9 3925 aaPredicted RBP8.56□□□□□ -1.04
TARDBP-218ENST00000617172 A0A0G2JPF8 293 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 CIB4A0PJX0 185 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 FAM234BA2RU67 622 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 CDHR4A6H8M9 788 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 OR5H1A6NKK0 313 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 CCT8L1PA6NM43 557 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 ZNF716A6NP11 495 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 HNRNPCL2B2RXH8 293 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 HNRNPCL3B7ZW38 293 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 H7C1Q1 480 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 CLOCKO15516 846 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 HNRNPCL1O60812 293 aaKnown RBP8.55□□□□□ -1.04
TARDBP-218ENST00000617172 ADAM11O75078 769 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 BCAS1O75363 584 aaPredicted RBP8.55□□□□□ -1.04
TARDBP-218ENST00000617172 LYZL6O75951 148 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 GPIP06744 558 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 HEXAP06865 529 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 THBS1P07996 1170 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 TFPTP0C1Z6 253 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 HNRNPCL4P0DMR1 293 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 IGHV1-2P23083 117 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 CXCR1P25024 350 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 TACR3P29371 465 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 POLR2JP52435 117 aaKnown RBP8.55□□□□□ -1.04
TARDBP-218ENST00000617172 ATP5J2P56134 94 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 DSTNP60981 165 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 RPS4XP62701 263 aaKnown RBP8.55□□□□□ -1.04
TARDBP-218ENST00000617172 BSPH1Q075Z2 132 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 EPS8Q12929 822 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 STK11Q15831 433 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 ZNF672Q499Z4 452 aaPredicted RBP8.55□□□□□ -1.04
TARDBP-218ENST00000617172 SLC9B1Q4ZJI4 515 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 LIN52Q52LA3 116 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 COX20Q5RI15 118 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 BEND6Q5SZJ8 279 aaPredicted RBP8.55□□□□□ -1.04
TARDBP-218ENST00000617172 PAQR6Q6TCH4 344 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 MIER2Q8N344 545 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 ZNF433Q8N7K0 673 aaPredicted RBP8.55□□□□□ -1.04
TARDBP-218ENST00000617172 OR52P1PQ8NH57 321 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 LILRB1Q8NHL6 650 aaPredicted RBP8.55□□□□□ -1.04
TARDBP-218ENST00000617172 PNPT1Q8TCS8 783 aaKnown RBP8.55□□□□□ -1.04
TARDBP-218ENST00000617172 SMAP2Q8WU79 429 aaPredicted RBP8.55□□□□□ -1.04
TARDBP-218ENST00000617172 SLC38A5Q8WUX1 472 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 GTPBP3Q969Y2 492 aaKnown RBP8.55□□□□□ -1.04
TARDBP-218ENST00000617172 GRIP2Q9C0E4 1043 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 OR11A1Q9GZK7 315 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 ADAM19Q9H013 955 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 PIF1Q9H611 641 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 TAS2R16Q9NYV7 291 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 MALT1Q9UDY8 824 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 SLC9A8Q9Y2E8 581 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 IFT52Q9Y366 437 aa8.55□□□□□ -1.04
TARDBP-218ENST00000617172 FLNAP21333 2647 aaKnown RBP8.54□□□□□ -1.04
TARDBP-218ENST00000617172 ARID1AO14497 2285 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 A0A096LPI6 279 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 A0A1W2PP18 115 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 DPRXA6NFQ7 191 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 OVOL3O00110 214 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 AP3D1O14617 1153 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 C1QCP02747 245 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 DANCRP0C864 163 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 CCNA2P20248 432 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 PTAFRP25105 342 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 MRPL19P49406 292 aaKnown RBP8.54□□□□□ -1.04
TARDBP-218ENST00000617172 MVDP53602 400 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 STX1BP61266 288 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 IRX1P78414 480 aaPredicted RBP8.54□□□□□ -1.04
TARDBP-218ENST00000617172 TGFBR3Q03167 851 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 PLAURQ03405 335 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 C6orf10Q5SRN2 563 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 AGBL2Q5U5Z8 902 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 RNF220Q5VTB9 566 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 PRAMEF8Q5VWM4 474 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 PRAMEF7Q5VXH5 474 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 WBP2NLQ6ICG8 309 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 KLHL17Q6TDP4 642 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 EPGNQ6UW88 154 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 TMEM108Q6UXF1 575 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 HMGN2P46Q86SG4 172 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 CCDC103Q8IW40 242 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 DEPDC4Q8N2C3 294 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 SLC35B4Q969S0 331 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 C7orf26Q96N11 449 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 MUS81Q96NY9 551 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 SMR3AQ99954 134 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 SF3B5Q9BWJ5 86 aaKnown RBP8.54□□□□□ -1.04
TARDBP-218ENST00000617172 TRIM2Q9C040 744 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 ALG2Q9H553 416 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 TMEM45AQ9NWC5 275 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 CISD1Q9NZ45 108 aaKnown RBP8.54□□□□□ -1.04
TARDBP-218ENST00000617172 UPB1Q9UBR1 384 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 USH1CQ9Y6N9 552 aa8.54□□□□□ -1.04
TARDBP-218ENST00000617172 VPS13CQ709C8 3753 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms