RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 LINC00114Q6XXX2 140 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 TMPRSS11FQ6ZWK6 438 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 RNF113BQ8IZP6 322 aaKnown RBP7.1□□□□□ -1.27
NEK3-207ENST00000617054 ZNF441Q8N8Z8 693 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 OR52L1Q8NGH7 329 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 OR5M1Q8NGP8 315 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 MOSPD2Q8NHP6 518 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 ZPLD1Q8TCW7 415 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 ZNRF4Q8WWF5 429 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 NR4A3Q92570 626 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 TP53INP1Q96A56 240 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 SLC25A36Q96CQ1 311 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 ERMAPQ96PL5 475 aaPredicted RBP7.1□□□□□ -1.27
NEK3-207ENST00000617054 CMKLR1Q99788 373 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 ZNF426Q9BUY5 554 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 OR11A1Q9GZK7 315 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 CCDC86Q9H6F5 360 aaKnown RBP7.1□□□□□ -1.27
NEK3-207ENST00000617054 PCDHB10Q9UN67 800 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 SLC35A3Q9Y2D2 325 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 IER3IP1Q9Y5U9 82 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 DMXL2Q8TDJ6 3036 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 G3V3Y1 287 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 F10P00742 488 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 PDGFAP04085 211 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 ACP1P24666 158 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 AQP2P41181 271 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 PSMD4P55036 377 aaKnown RBP7.1□□□□□ -1.27
NEK3-207ENST00000617054 ERVK-25P63136 954 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 LTBQ06643 244 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 CRMP1Q14194 572 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 TBCEQ15813 527 aaPredicted RBP7.1□□□□□ -1.27
NEK3-207ENST00000617054 ZNF528Q3MIS6 628 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 LIPKQ5VXJ0 399 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 CXXC5Q7LFL8 322 aaKnown RBP7.1□□□□□ -1.27
NEK3-207ENST00000617054 TIPARPQ7Z3E1 657 aaKnown RBP7.1□□□□□ -1.27
NEK3-207ENST00000617054 ANKRD13BQ86YJ7 626 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 KDM8Q8N371 416 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 OR10G3Q8NGC4 313 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 ZNF420Q8TAQ5 688 aaPredicted RBP7.1□□□□□ -1.27
NEK3-207ENST00000617054 RAB2BQ8WUD1 216 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 C14orf105Q9NVL8 296 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 GPN3Q9UHW5 284 aaPredicted RBP7.1□□□□□ -1.27
NEK3-207ENST00000617054 YARS2Q9Y2Z4 477 aaKnown RBP7.1□□□□□ -1.27
NEK3-207ENST00000617054 LOXL2Q9Y4K0 774 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 MUC6Q6W4X9 2439 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 ZNF318Q5VUA4 2279 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 SMIM30A4D0T7 59 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 PRODHO43272 600 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 STK17BO94768 372 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 HIST1H1CP16403 213 aaKnown RBP7.1□□□□□ -1.27
NEK3-207ENST00000617054 RGS6P49758 472 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 GAS1P54826 345 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 SLC26A5P58743 744 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 INSM1Q01101 510 aaPredicted RBP7.1□□□□□ -1.27
NEK3-207ENST00000617054 IRF3Q14653 427 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 TMEM201Q5SNT2 666 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 PRAMEF20Q5VT98 475 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 WBP2NLQ6ICG8 309 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 ARSKQ6UWY0 536 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 DBX2Q6ZNG2 339 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 RAB11FIP2Q7L804 512 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 SIRT6Q8N6T7 355 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 OR52E2Q8NGJ4 325 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 TAAR8Q969N4 342 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 RASD2Q96D21 266 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 TSSK2Q96PF2 358 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 POLR2J2Q9GZM3 115 aaKnown RBP7.1□□□□□ -1.27
NEK3-207ENST00000617054 KRCC1Q9NPI7 259 aaPredicted RBP7.1□□□□□ -1.27
NEK3-207ENST00000617054 MRTO4Q9UKD2 239 aaKnown RBP7.1□□□□□ -1.27
NEK3-207ENST00000617054 ICAM5Q9UMF0 924 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 ERGIC3Q9Y282 383 aa7.1□□□□□ -1.27
NEK3-207ENST00000617054 H7C1C5 153 aa7.09□□□□□ -1.27
NEK3-207ENST00000617054 SMAD7O15105 426 aaKnown RBP7.09□□□□□ -1.27
NEK3-207ENST00000617054 AHCYL1O43865 530 aa7.09□□□□□ -1.27
NEK3-207ENST00000617054 AIREO43918 545 aa7.09□□□□□ -1.27
NEK3-207ENST00000617054 BCL10O95999 233 aa7.09□□□□□ -1.27
NEK3-207ENST00000617054 CLK1P49759 484 aaKnown RBP7.09□□□□□ -1.27
NEK3-207ENST00000617054 ENTPD1P49961 510 aa7.09□□□□□ -1.27
NEK3-207ENST00000617054 NRG3P56975 720 aa7.09□□□□□ -1.27
NEK3-207ENST00000617054 LCN6P62502 163 aa7.09□□□□□ -1.27
NEK3-207ENST00000617054 MC2RQ01718 297 aa7.09□□□□□ -1.27
NEK3-207ENST00000617054 INSL4Q14641 139 aa7.09□□□□□ -1.27
NEK3-207ENST00000617054 SSX1Q16384 188 aa7.09□□□□□ -1.27
NEK3-207ENST00000617054 COL28A1Q2UY09 1125 aa7.09□□□□□ -1.27
NEK3-207ENST00000617054 ZNF791Q3KP31 576 aaPredicted RBP7.09□□□□□ -1.27
NEK3-207ENST00000617054 AADACL4Q5VUY2 407 aa7.09□□□□□ -1.27
NEK3-207ENST00000617054 FAM198BQ6UWH4 519 aa7.09□□□□□ -1.27
NEK3-207ENST00000617054 ATG4DQ86TL0 474 aaPredicted RBP7.09□□□□□ -1.27
NEK3-207ENST00000617054 NAXDQ8IW45 347 aa7.09□□□□□ -1.27
NEK3-207ENST00000617054 SLC37A3Q8NCC5 494 aa7.09□□□□□ -1.27
NEK3-207ENST00000617054 FAM71CQ8NEG0 241 aa7.09□□□□□ -1.27
NEK3-207ENST00000617054 SGTBQ96EQ0 304 aa7.09□□□□□ -1.27
NEK3-207ENST00000617054 NMNAT3Q96T66 252 aa7.09□□□□□ -1.27
NEK3-207ENST00000617054 EDEM2Q9BV94 578 aa7.09□□□□□ -1.27
NEK3-207ENST00000617054 CDCA4Q9BXL8 241 aa7.09□□□□□ -1.27
NEK3-207ENST00000617054 SEMA4CQ9C0C4 833 aa7.09□□□□□ -1.27
NEK3-207ENST00000617054 HOXD1Q9GZZ0 328 aa7.09□□□□□ -1.27
NEK3-207ENST00000617054 MARCH7Q9H992 704 aa7.09□□□□□ -1.27
NEK3-207ENST00000617054 H2AFY2Q9P0M6 372 aaPredicted RBP7.09□□□□□ -1.27
NEK3-207ENST00000617054 OSGIN1Q9UJX0 560 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms