RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 KANTRA0A1W2PQU2 76 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 LRP5LA4QPB2 252 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 B4DXG7 233 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 FZD6O60353 706 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 GPX3P22352 226 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 UQCRC1P31930 480 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 EFNA3P52797 238 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 RAB40BQ12829 278 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 EMC4Q5J8M3 183 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 RBMS3Q6XE24 437 aaKnown RBP9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 MBOAT2Q6ZWT7 520 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 H1FNTQ75WM6 255 aaPredicted RBP9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 FRMD1Q8N878 549 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 LSM14AQ8ND56 463 aaKnown RBP9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 OR51T1Q8NGJ9 327 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 CREB3L1Q96BA8 519 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 ZNF845Q96IR2 970 aaPredicted RBP9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 LRR1Q96L50 414 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 EBF2Q9HAK2 575 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 DCAF13Q9NV06 445 aaKnown RBP9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 KCNN3Q9UGI6 736 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 HIF3AQ9Y2N7 669 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 PRAMEF27A3QJZ7 478 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 RBBP9O75884 186 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 ETV6P41212 452 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 RAD52P43351 418 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 PITPNBP48739 271 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 TAS2R31P59538 309 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 PLBD1Q6P4A8 553 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 MOB3CQ70IA8 216 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 PGAP1Q75T13 922 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 SPRED1Q7Z699 444 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 AKAP14Q86UN6 197 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 OR4N2Q8NGD1 307 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 TMEM38AQ9H6F2 299 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 DDX31Q9H8H2 851 aaKnown RBP9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 TNFRSF21O75509 655 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 OR7A10O76100 309 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 CDRT1O95170 752 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 MRPS10P82664 201 aaKnown RBP9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 RNPS1Q15287 305 aaKnown RBP9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 COL13A1Q5TAT6 717 aaPredicted RBP9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 ARMC1Q9NVT9 282 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 C5AR2Q9P296 337 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 COPZ2Q9P299 210 aa9.03□□□□□ -0.96
TNFRSF9-204ENST00000615230 F5H5K5 113 aa9.02□□□□□ -0.96
TNFRSF9-204ENST00000615230 MAOAP21397 527 aa9.02□□□□□ -0.96
TNFRSF9-204ENST00000615230 EVI2BP34910 448 aa9.02□□□□□ -0.96
TNFRSF9-204ENST00000615230 MAGEA2P43356 314 aa9.02□□□□□ -0.96
TNFRSF9-204ENST00000615230 PMS2CLQ68D20 193 aa9.02□□□□□ -0.96
TNFRSF9-204ENST00000615230 PKP2Q99959 881 aa9.02□□□□□ -0.96
TNFRSF9-204ENST00000615230 RTL8AQ9BWD3 113 aa9.02□□□□□ -0.96
TNFRSF9-204ENST00000615230 FBP2O00757 339 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 TOR1AO14656 332 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 PRAMEF10O60809 474 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 TFF2Q03403 129 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 PLK5Q496M5 336 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 KHDC1Q4VXA5 237 aaKnown RBP9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 SBSNQ6UWP8 590 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 MEPCEQ7L2J0 689 aaKnown RBP9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 OR5D16Q8NGK9 328 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 ASB5Q8WWX0 329 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 MSLNLQ96KJ4 702 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 HHLA2Q9UM44 414 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 ATP23Q9Y6H3 246 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 SLC22A20A6NK97 555 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 GJB3O75712 270 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 MLLT10P55197 1068 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 CHRNEQ04844 493 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 MPEG1Q2M385 716 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 KCTD21Q4G0X4 260 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 CLEC14AQ86T13 490 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 KHSRPQ92945 711 aaKnown RBP eCLIP9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 MUL1Q969V5 352 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 CPNE4Q96A23 557 aaPredicted RBP9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 MSI2Q96DH6 328 aaKnown RBP9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 SORCS2Q96PQ0 1159 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 SPIN2AQ99865 258 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 SPIN2BQ9BPZ2 258 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 OSBPL7Q9BZF2 842 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 REV1Q9UBZ9 1251 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 STEAP1Q9UHE8 339 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 METTL15A6NJ78 407 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 GFRA3O60609 400 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 DIRAS1O95057 198 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 NELFEP18615 380 aaKnown RBP9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 MAP2K3P46734 347 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 LGALS4P56470 323 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 BNIP3Q12983 259 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 TSPAN31Q12999 210 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 TMEM69Q5SWH9 247 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 FAM69AQ5T7M9 428 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 BEND4Q6ZU67 534 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 PRICKLE2Q7Z3G6 844 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 FBXL14Q8N1E6 418 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 OR5H2Q8NGV7 314 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 TMEM163Q8TC26 289 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 SCGB1C1Q8TD33 95 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 A0A0G2JMP0 313 aa9.02□□□□□ -0.97
TNFRSF9-204ENST00000615230 K7EQS6 105 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms