RNA–Protein interactions for RNA: ENST00000615088.1

AL109954.3-201, humanhuman

BASIC

Gene AL109954.3, Length 558 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL109954.3-201ENST00000615088 CCDC28BQ9BUN5 200 aa11.29□□□□□ -0.6
AL109954.3-201ENST00000615088 CXorf56Q9H5V9 222 aa11.29□□□□□ -0.6
AL109954.3-201ENST00000615088 DLL4Q9NR61 685 aa11.29□□□□□ -0.6
AL109954.3-201ENST00000615088 ARGLU1Q9NWB6 273 aaPredicted RBP11.29□□□□□ -0.6
AL109954.3-201ENST00000615088 ZNF443Q9Y2A4 671 aaPredicted RBP11.29□□□□□ -0.6
AL109954.3-201ENST00000615088 IFT52Q9Y366 437 aa11.29□□□□□ -0.6
AL109954.3-201ENST00000615088 DSPPQ9NZW4 1301 aa11.29□□□□□ -0.6
AL109954.3-201ENST00000615088 A0A096LPI6 279 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 CDHR4A6H8M9 788 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 ZNF716A6NP11 495 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 C5orf58C9J3I9 102 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 CLIC1O00299 241 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 NR5A2O00482 541 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 CLOCKO15516 846 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 MRPL33O75394 65 aaKnown RBP11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 PLAUP00749 431 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 TFPTP0C1Z6 253 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 GGT1P19440 569 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 NCF2P19878 526 aaPredicted RBP11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 PPIBP23284 216 aaKnown RBP11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 ADSLP30566 484 aaPredicted RBP11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 IDUAP35475 653 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 MRPL19P49406 292 aaKnown RBP11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 SLC16A1P53985 500 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 IRX1P78414 480 aaPredicted RBP11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 FADDQ13158 208 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 PPA1Q15181 289 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 MAPK11Q15759 364 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 RPS26P11Q5JNZ5 115 aaPredicted RBP11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 NCMAPQ5T1S8 102 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 RNF220Q5VTB9 566 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 FBXW9Q5XUX1 488 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 WBP2NLQ6ICG8 309 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 SLC2A7Q6PXP3 512 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 PRSS57Q6UWY2 283 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 BIVMQ86UB2 503 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 P2RY8Q86VZ1 359 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 CADM2Q8N3J6 435 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 ZNF611Q8N823 705 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 BBS10Q8TAM1 723 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 GTF2H4Q92759 462 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 SPATA9Q9BWV2 254 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 PAIP1Q9H074 479 aaKnown RBP11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 SLCO1B3Q9NPD5 702 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 RLIMQ9NVW2 624 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 PCDHB14Q9Y5E9 798 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 MED13LQ71F56 2210 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 ABCA4P78363 2273 aa11.28□□□□□ -0.6
AL109954.3-201ENST00000615088 CIB4A0PJX0 185 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 CCT8L1PA6NM43 557 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 HMGB1P1B2RPK0 211 aaPredicted RBP11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 GPIP06744 558 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 GKN3PP0CG01 181 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 COX5AP20674 150 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 IGHV1-2P23083 117 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 PTH2RP49190 550 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 IDH3AP50213 366 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 AQP5P55064 265 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 RGNQ15493 299 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 TTMPQ5BVD1 217 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 ZNF311Q5JNZ3 666 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 TIMM23BQ5SRD1 257 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 PRAMEF8Q5VWM4 474 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 PRAMEF7Q5VXH5 474 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 ADAM5Q6NVV9 412 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 CASP12Q6UXS9 341 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 HDXQ7Z353 690 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 YTHDF3Q7Z739 585 aaKnown RBP11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 KRTAP1-3Q8IUG1 177 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 CCDC103Q8IW40 242 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 FBXW5Q969U6 566 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 SPDL1Q96EA4 605 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 EBF4Q9BQW3 602 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 BDH2Q9BUT1 245 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 TAPBPLQ9BX59 468 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 GSX2Q9BZM3 304 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 ADAM19Q9H013 955 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 A4GALTQ9NPC4 353 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 INTS9Q9NV88 658 aaKnown RBP11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 PARPBPQ9NWS1 579 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 ASB6Q9NWX5 421 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 UPB1Q9UBR1 384 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 SLC9A8Q9Y2E8 581 aa11.27□□□□□ -0.61
AL109954.3-201ENST00000615088 FAM171A2A8MVW0 826 aa11.26□□□□□ -0.61
AL109954.3-201ENST00000615088 IGHV3-9P01782 118 aa11.26□□□□□ -0.61
AL109954.3-201ENST00000615088 INHBBP09529 407 aa11.26□□□□□ -0.61
AL109954.3-201ENST00000615088 IMPDH2P12268 514 aa11.26□□□□□ -0.61
AL109954.3-201ENST00000615088 EDNRAP25101 427 aa11.26□□□□□ -0.61
AL109954.3-201ENST00000615088 RPS4XP62701 263 aaKnown RBP11.26□□□□□ -0.61
AL109954.3-201ENST00000615088 H3F3AP84243 136 aa11.26□□□□□ -0.61
AL109954.3-201ENST00000615088 CEACAM7Q14002 265 aa11.26□□□□□ -0.61
AL109954.3-201ENST00000615088 OTUD3Q5T2D3 398 aaPredicted RBP11.26□□□□□ -0.61
AL109954.3-201ENST00000615088 BLOC1S3Q6QNY0 202 aa11.26□□□□□ -0.61
AL109954.3-201ENST00000615088 PAQR6Q6TCH4 344 aa11.26□□□□□ -0.61
AL109954.3-201ENST00000615088 CLIP4Q8N3C7 705 aa11.26□□□□□ -0.61
AL109954.3-201ENST00000615088 ZNF433Q8N7K0 673 aaPredicted RBP11.26□□□□□ -0.61
AL109954.3-201ENST00000615088 Q96MF0 132 aa11.26□□□□□ -0.61
AL109954.3-201ENST00000615088 GSX1Q9H4S2 264 aaPredicted RBP11.26□□□□□ -0.61
AL109954.3-201ENST00000615088 RABEP2Q9H5N1 569 aa11.26□□□□□ -0.61
AL109954.3-201ENST00000615088 BCL2L10Q9HD36 194 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms