RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 SKP2Q13309 424 aa13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 TBRG1Q3YBR2 411 aa13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 TRIM46Q7Z4K8 759 aa13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 POMGNT2Q8NAT1 580 aa13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 CKAP2Q8WWK9 683 aa13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 METTL2AQ96IZ6 378 aaKnown RBP13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 TSSK3Q96PN8 268 aa13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 PAFAH2Q99487 392 aa13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 NAPGQ99747 312 aaPredicted RBP13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 NAA11Q9BSU3 229 aaPredicted RBP13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 TPK1Q9H3S4 243 aa13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 CTPS2Q9NRF8 586 aa13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 ACER3Q9NUN7 267 aa13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 PKD1L1Q8TDX9 2849 aa13.32□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 LOC105371242A0A075B767 164 aa13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 NPIPB9F8W1W9 429 aa13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 TBX19O60806 448 aa13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 CECR9P0C854 216 aa13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 GAAP10253 952 aa13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 ANPEPP15144 967 aa13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 THBS4P35443 961 aa13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 CLK1P49759 484 aaKnown RBP13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 GNG11P61952 73 aa13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 GPR68Q15743 365 aa13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 SPDYE7PQ495Y7 208 aa13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 ZDHHC24Q6UX98 284 aa13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 CCNYL1Q8N7R7 359 aa13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 OR56A1Q8NGH5 318 aa13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 DCAKDQ8WVC6 231 aa13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 L3HYPDHQ96EM0 354 aa13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 SLC6A7Q99884 636 aa13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 CCDC106Q9BWC9 280 aa13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 OR11A1Q9GZK7 315 aa13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 MOV10Q9HCE1 1003 aaKnown RBP13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 TREM2Q9NZC2 230 aa13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 TMEM216Q9P0N5 145 aa13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 TMEM181Q9P2C4 612 aa13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 TRAPPC4Q9Y296 219 aa13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 KCNE3Q9Y6H6 103 aa13.31□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 POC1B-GALNT4F8VUJ3 575 aa13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 DNAJA2O60884 412 aa13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 HKR1P10072 659 aa13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 CALCRP30988 508 aa13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 CCT3P49368 545 aaKnown RBP13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 PRKAA2P54646 552 aa13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 UBA52P62987 128 aaKnown RBP13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 SLC35A1P78382 337 aa13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 C3orf36Q3SXR2 165 aa13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 ZNF311Q5JNZ3 666 aa13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 EIF3MQ7L2H7 374 aaKnown RBP13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 AAED1Q7RTV5 226 aa13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 R3HCC1LQ7Z5L2 792 aaKnown RBP13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 CDK20Q8IZL9 346 aa13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 SPATA4Q8NEY3 305 aa13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 OR1K1Q8NGR3 316 aa13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 CLHC1Q8NHS4 586 aa13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 AURKBQ96GD4 344 aaPredicted RBP13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 BOD1Q96IK1 185 aa13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 CCT7Q99832 543 aa13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 NMUR2Q9GZQ4 415 aa13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 SLC52A3Q9NQ40 469 aa13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 SIRT3Q9NTG7 399 aaPredicted RBP13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 C1orf109Q9NX04 203 aa13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 ZNF281Q9Y2X9 895 aa13.3□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 ZNF587BE7ETH6 402 aa13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 ARAFP10398 606 aa13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 CCNA2P20248 432 aa13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 ACHEP22303 614 aa13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 RYKP34925 604 aa13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 H3F3AP84243 136 aa13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 MYBPC1Q00872 1141 aa13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 C2orf54Q08AI8 447 aa13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 PDE7AQ13946 482 aa13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 SLC17A1Q14916 467 aa13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 KIAA0040Q15053 153 aa13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 SLC9B1Q4ZJI4 515 aa13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 RBMS3Q6XE24 437 aaKnown RBP13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 GRINAQ7Z429 371 aa13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 ZDHHC22Q8N966 263 aa13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 NANPQ8TBE9 248 aa13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 TMEM45BQ96B21 275 aa13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 DDIT4LQ96D03 193 aa13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 MTERF3Q96E29 417 aa13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 GSTO2Q9H4Y5 243 aa13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 NTN4Q9HB63 628 aa13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 ESM1Q9NQ30 184 aa13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 NINJ2Q9NZG7 142 aa13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 CRNNQ9UBG3 495 aaPredicted RBP13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 PPIAL4AQ9Y536 164 aa13.29□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 ARPC4-TTLL3A0A0A6YYG9 625 aa13.28□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 TMEM129A0AVI4 362 aa13.28□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 OR6C65A6NJZ3 312 aa13.28□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 H3BQF6 201 aa13.28□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 SLC28A1O00337 649 aa13.28□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 NR5A2O00482 541 aa13.28□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 LGI1O95970 557 aa13.28□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 SDC1P18827 310 aa13.28□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 FPR2P25090 351 aa13.28□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 TUBA1BP68363 451 aa13.28□□□□□ -0.28
NEDD8-MDP1-204ENST00000605847 TUBA4AP68366 448 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms