RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 LIN52Q52LA3 116 aa13.97□□□□□ -0.17
VRK3-221ENST00000600284 ALKBH2Q6NS38 261 aa13.97□□□□□ -0.17
VRK3-221ENST00000600284 SEZ6L2Q6UXD5 910 aa13.97□□□□□ -0.17
VRK3-221ENST00000600284 CLEC9AQ6UXN8 241 aa13.97□□□□□ -0.17
VRK3-221ENST00000600284 MAVSQ7Z434 540 aa13.97□□□□□ -0.17
VRK3-221ENST00000600284 HMGN2P46Q86SG4 172 aa13.97□□□□□ -0.17
VRK3-221ENST00000600284 ZNF433Q8N7K0 673 aaPredicted RBP13.97□□□□□ -0.17
VRK3-221ENST00000600284 LILRB1Q8NHL6 650 aaPredicted RBP13.97□□□□□ -0.17
VRK3-221ENST00000600284 PNPT1Q8TCS8 783 aaKnown RBP13.97□□□□□ -0.17
VRK3-221ENST00000600284 FBXW5Q969U6 566 aa13.97□□□□□ -0.17
VRK3-221ENST00000600284 APH1AQ96BI3 265 aa13.97□□□□□ -0.17
VRK3-221ENST00000600284 NAA11Q9BSU3 229 aaPredicted RBP13.97□□□□□ -0.17
VRK3-221ENST00000600284 OR11A1Q9GZK7 315 aa13.97□□□□□ -0.17
VRK3-221ENST00000600284 TPT1P8Q9HAU6 139 aa13.97□□□□□ -0.17
VRK3-221ENST00000600284 SLC6A13Q9NSD5 602 aa13.97□□□□□ -0.17
VRK3-221ENST00000600284 NIPBLQ6KC79 2804 aaeCLIP13.97□□□□□ -0.17
VRK3-221ENST00000600284 TMEM72A0PK05 275 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 FAM234BA2RU67 622 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 CDHR4A6H8M9 788 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 TMEM247A6NEH6 219 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 AP3D1O14617 1153 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 MRPL33O75394 65 aaKnown RBP13.96□□□□□ -0.17
VRK3-221ENST00000600284 TGDSO95455 350 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 HEXAP06865 529 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 TFPTP0C1Z6 253 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 EDNRAP25101 427 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 MRPL19P49406 292 aaKnown RBP13.96□□□□□ -0.17
VRK3-221ENST00000600284 OR2B6P58173 313 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 DSTNP60981 165 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 RPS4XP62701 263 aaKnown RBP13.96□□□□□ -0.17
VRK3-221ENST00000600284 LTBQ06643 244 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 ZNF672Q499Z4 452 aaPredicted RBP13.96□□□□□ -0.17
VRK3-221ENST00000600284 AGBL2Q5U5Z8 902 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 EPGNQ6UW88 154 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 MIER2Q8N344 545 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 OR52P1PQ8NH57 321 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 C7orf26Q96N11 449 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 OR52B2Q96RD2 323 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 SMR3AQ99954 134 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 ARMC7Q9H6L4 198 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 PARPBPQ9NWS1 579 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 ASB6Q9NWX5 421 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 MALT1Q9UDY8 824 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 USH1CQ9Y6N9 552 aa13.96□□□□□ -0.17
VRK3-221ENST00000600284 PRR14LQ5THK1 2151 aa13.96□□□□□ -0.18
VRK3-221ENST00000600284 A0A0G2JPF8 293 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 DPRXA6NFQ7 191 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 OR5H1A6NKK0 313 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 HNRNPCL2B2RXH8 293 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 HNRNPCL3B7ZW38 293 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 H7C1Q1 480 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 OVOL3O00110 214 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 CLOCKO15516 846 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 HNRNPCL1O60812 293 aaKnown RBP13.95□□□□□ -0.18
VRK3-221ENST00000600284 THBS1P07996 1170 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 DANCRP0C864 163 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 HNRNPCL4P0DMR1 293 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 ETFAP13804 333 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 CCNA2P20248 432 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 BSPH1Q075Z2 132 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 LARS2Q15031 903 aaKnown RBP13.95□□□□□ -0.18
VRK3-221ENST00000600284 STK11Q15831 433 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 C1QTNF12Q5T7M4 302 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 RNF220Q5VTB9 566 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 PAQR6Q6TCH4 344 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 CCDC103Q8IW40 242 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 UBE2J2Q8N2K1 259 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 SMAP2Q8WU79 429 aaPredicted RBP13.95□□□□□ -0.18
VRK3-221ENST00000600284 SLC38A5Q8WUX1 472 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 TRMT61AQ96FX7 289 aaKnown RBP13.95□□□□□ -0.18
VRK3-221ENST00000600284 RADILQ96JH8 1075 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 GRIP2Q9C0E4 1043 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 RAD21L1Q9H4I0 556 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 PIF1Q9H611 641 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 TAS2R16Q9NYV7 291 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 ZNF232Q9UNY5 417 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 LAMP3Q9UQV4 416 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 IFT52Q9Y366 437 aa13.95□□□□□ -0.18
VRK3-221ENST00000600284 BCHEP06276 602 aa13.94□□□□□ -0.18
VRK3-221ENST00000600284 GPIP06744 558 aa13.94□□□□□ -0.18
VRK3-221ENST00000600284 IMPDH2P12268 514 aa13.94□□□□□ -0.18
VRK3-221ENST00000600284 CXCR1P25024 350 aa13.94□□□□□ -0.18
VRK3-221ENST00000600284 NTF4P34130 210 aa13.94□□□□□ -0.18
VRK3-221ENST00000600284 ACAA2P42765 397 aaKnown RBP13.94□□□□□ -0.18
VRK3-221ENST00000600284 ATP5J2P56134 94 aa13.94□□□□□ -0.18
VRK3-221ENST00000600284 COPZ1P61923 177 aa13.94□□□□□ -0.18
VRK3-221ENST00000600284 SLC17A1Q14916 467 aa13.94□□□□□ -0.18
VRK3-221ENST00000600284 ETFDHQ16134 617 aa13.94□□□□□ -0.18
VRK3-221ENST00000600284 C6orf10Q5SRN2 563 aa13.94□□□□□ -0.18
VRK3-221ENST00000600284 PRAMEF8Q5VWM4 474 aa13.94□□□□□ -0.18
VRK3-221ENST00000600284 PRAMEF7Q5VXH5 474 aa13.94□□□□□ -0.18
VRK3-221ENST00000600284 WBP2NLQ6ICG8 309 aa13.94□□□□□ -0.18
VRK3-221ENST00000600284 OR7E24Q6IFN5 339 aa13.94□□□□□ -0.18
VRK3-221ENST00000600284 ZNF836Q6ZNA1 936 aa13.94□□□□□ -0.18
VRK3-221ENST00000600284 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.94□□□□□ -0.18
VRK3-221ENST00000600284 VRK2Q86Y07 508 aa13.94□□□□□ -0.18
VRK3-221ENST00000600284 CIARTQ8N365 385 aaPredicted RBP13.94□□□□□ -0.18
VRK3-221ENST00000600284 GTF2H4Q92759 462 aa13.94□□□□□ -0.18
VRK3-221ENST00000600284 VPS33AQ96AX1 596 aa13.94□□□□□ -0.18
VRK3-221ENST00000600284 MUS81Q96NY9 551 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms