RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 PIP5K1BO14986 540 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 KCNAB3O43448 404 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 SPRY1O43609 319 aaPredicted RBP5.31□□□□□ -1.56
VRK3-220ENST00000600259 TRIM13O60858 407 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 PEX11AO75192 247 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 STX11O75558 287 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 CRCPO75575 148 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 LYPLA1O75608 230 aaPredicted RBP5.31□□□□□ -1.56
VRK3-220ENST00000600259 CYP7B1O75881 506 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 VENTXO95231 258 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 IGLV1-44P01699 117 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 C1QCP02747 245 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 CHRNGP07510 517 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 KRT16P08779 473 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 TFPIP10646 304 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 BMP4P12644 408 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 ITGA2P17301 1181 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 MATN1P21941 496 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 FKBP2P26885 142 aaKnown RBP5.31□□□□□ -1.56
VRK3-220ENST00000600259 MPGP29372 298 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 CALCRP30988 508 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 SERPINF1P36955 418 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 CCT5P48643 541 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 P2RY4P51582 365 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 CCR4P51679 360 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 OR2B6P58173 313 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 PRPS1P60891 318 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 RPS26P62854 115 aaKnown RBP5.31□□□□□ -1.56
VRK3-220ENST00000600259 FUT5Q11128 374 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 RIN1Q13671 783 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 PCLAFQ15004 111 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 EFNB3Q15768 340 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 WHAMMP3Q1A5X7 153 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 LSM12Q3MHD2 195 aaKnown RBP5.31□□□□□ -1.56
VRK3-220ENST00000600259 GALNTL6Q49A17 601 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 HIKESHIQ53FT3 197 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 CFAP157Q5JU67 520 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 IL23RQ5VWK5 629 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 TYW3Q6IPR3 259 aaKnown RBP5.31□□□□□ -1.56
VRK3-220ENST00000600259 ANKRD16Q6P6B7 361 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 EMBQ6PCB8 327 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 DEF8Q6ZN54 512 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 FRRS1Q6ZNA5 592 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 EIF3MQ7L2H7 374 aaKnown RBP5.31□□□□□ -1.56
VRK3-220ENST00000600259 LINGO2Q7L985 606 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 GRINAQ7Z429 371 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 CLEC4FQ8N1N0 589 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 ZCCHC24Q8N2G6 241 aaKnown RBP5.31□□□□□ -1.56
VRK3-220ENST00000600259 NATD1Q8N6N6 113 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 TMCO5AQ8N6Q1 288 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.31□□□□□ -1.56
VRK3-220ENST00000600259 ZNF614Q8N883 585 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 OR5AK3PQ8NH89 298 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 PIGXQ8TBF5 258 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 TWIST2Q8WVJ9 160 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 OIT3Q8WWZ8 545 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 CNOT9Q92600 299 aaKnown RBP5.31□□□□□ -1.56
VRK3-220ENST00000600259 BCL2L2Q92843 193 aaPredicted RBP5.31□□□□□ -1.56
VRK3-220ENST00000600259 TMEM45BQ96B21 275 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 ARL8AQ96BM9 186 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 C3orf49Q96BT1 292 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 MOAP1Q96BY2 351 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 CHMP6Q96FZ7 201 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 ZNF385AQ96PM9 386 aaKnown RBP5.31□□□□□ -1.56
VRK3-220ENST00000600259 PIMREGQ9BSJ6 248 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 TRMOQ9BU70 441 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 ADAM19Q9H013 955 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 NELFAQ9H3P2 528 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 PARPBPQ9NWS1 579 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 TMEM181Q9P2C4 612 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 CRNNQ9UBG3 495 aaPredicted RBP5.31□□□□□ -1.56
VRK3-220ENST00000600259 TBK1Q9UHD2 729 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 TMEFF2Q9UIK5 374 aaPredicted RBP5.31□□□□□ -1.56
VRK3-220ENST00000600259 OSGIN1Q9UJX0 560 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 FIS1Q9Y3D6 152 aa5.31□□□□□ -1.56
VRK3-220ENST00000600259 TRRAPQ9Y4A5 3859 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 TMED7-TICAM2A0A0A6YYA0 188 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 TMEM72A0PK05 275 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 DUXAA6NLW8 204 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 TMEM229AB2RXF0 380 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 TMEM114B3SHH9 223 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 B9A039 149 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 NR5A2O00482 541 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 AP3D1O14617 1153 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 KLF11O14901 512 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 ANKRD28O15084 1053 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 ZNF208O43345 1280 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 TCF21O43680 179 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 KIAA0513O60268 411 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 PDE5AO76074 875 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 AK1P00568 194 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 SHBGP04278 402 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 OR4A8P0C604 315 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 OR12D1P0DN82 309 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 DDX5P17844 614 aaKnown RBP5.3□□□□□ -1.56
VRK3-220ENST00000600259 HNF1AP20823 631 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 PRPS1L1P21108 318 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 RYKP34925 604 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 HPCAL1P37235 193 aa5.3□□□□□ -1.56
VRK3-220ENST00000600259 RPL3P39023 403 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms