RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 PGCP20142 388 aa9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 APOBEC3AP31941 199 aaPredicted RBP9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 IDH2P48735 452 aaKnown RBP9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 PDK3Q15120 406 aa9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 SWI5Q1ZZU3 235 aa9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 ARHGAP11BQ3KRB8 267 aa9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 LSM12Q3MHD2 195 aaKnown RBP9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 FAM166AQ6J272 317 aa9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 ZNF544Q6NX49 715 aa9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 FRRS1Q6ZNA5 592 aa9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 C16orf62Q7Z3J2 963 aa9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 SPATA19Q7Z5L4 167 aa9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 RIMKLAQ8IXN7 391 aa9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 IFT20Q8IY31 132 aa9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 DEPDC4Q8N2C3 294 aa9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 ZCCHC24Q8N2G6 241 aaKnown RBP9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 FAM71CQ8NEG0 241 aa9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 MNS1Q8NEH6 495 aa9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 OR4A15Q8NGL6 344 aa9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 PIGXQ8TBF5 258 aa9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 XAGE5Q8WWM1 108 aa9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 TMEM234Q8WY98 164 aa9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 CNOT9Q92600 299 aaKnown RBP9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 ZNF385AQ96PM9 386 aaKnown RBP9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 TRMOQ9BU70 441 aa9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 BHLHE41Q9C0J9 482 aaPredicted RBP9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 BPESC1Q9GZL8 116 aa9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 UPB1Q9UBR1 384 aa9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 LPAR3Q9UBY5 353 aa9.78□□□□□ -0.84
PRKCSH-220ENST00000593104 IGHV1-18A0A0C4DH31 117 aa9.77□□□□□ -0.85
PRKCSH-220ENST00000593104 LYPLA1O75608 230 aaPredicted RBP9.77□□□□□ -0.85
PRKCSH-220ENST00000593104 PMS2P2O95744 297 aa9.77□□□□□ -0.85
PRKCSH-220ENST00000593104 FGF4P08620 206 aa9.77□□□□□ -0.85
PRKCSH-220ENST00000593104 KRT16P08779 473 aa9.77□□□□□ -0.85
PRKCSH-220ENST00000593104 CREB1P16220 341 aa9.77□□□□□ -0.85
PRKCSH-220ENST00000593104 MAPK1P28482 360 aa9.77□□□□□ -0.85
PRKCSH-220ENST00000593104 GZMKP49863 264 aa9.77□□□□□ -0.85
PRKCSH-220ENST00000593104 PDLIM4P50479 330 aa9.77□□□□□ -0.85
PRKCSH-220ENST00000593104 SLC16A1P53985 500 aa9.77□□□□□ -0.85
PRKCSH-220ENST00000593104 CR1LQ2VPA4 569 aa9.77□□□□□ -0.85
PRKCSH-220ENST00000593104 IQCCQ4KMZ1 466 aa9.77□□□□□ -0.85
PRKCSH-220ENST00000593104 EIF3MQ7L2H7 374 aaKnown RBP9.77□□□□□ -0.85
PRKCSH-220ENST00000593104 LINGO2Q7L985 606 aa9.77□□□□□ -0.85
PRKCSH-220ENST00000593104 GRINAQ7Z429 371 aa9.77□□□□□ -0.85
PRKCSH-220ENST00000593104 MYPOPQ86VE0 399 aaPredicted RBP9.77□□□□□ -0.85
PRKCSH-220ENST00000593104 SLC25A43Q8WUT9 341 aaPredicted RBP9.77□□□□□ -0.85
PRKCSH-220ENST00000593104 ROPN1LQ96C74 230 aa9.77□□□□□ -0.85
PRKCSH-220ENST00000593104 TUBGCP3Q96CW5 907 aa9.77□□□□□ -0.85
PRKCSH-220ENST00000593104 ZHX1-C8orf76Q96EF9 292 aa9.77□□□□□ -0.85
PRKCSH-220ENST00000593104 PIMREGQ9BSJ6 248 aa9.77□□□□□ -0.85
PRKCSH-220ENST00000593104 ATAD3AQ9NVI7 634 aa9.77□□□□□ -0.85
PRKCSH-220ENST00000593104 WDR45Q9Y484 360 aa9.77□□□□□ -0.85
PRKCSH-220ENST00000593104 SVEP1Q4LDE5 3571 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 A0A096LPE4 126 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 TMED7-TICAM2A0A0A6YYA0 188 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 A0A1W2PPZ6 126 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 TLDC2A0PJX2 215 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 NPHS1O60500 1241 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 AKR7A3O95154 331 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 LGI1O95970 557 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 CELA3BP08861 270 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 CSF3P09919 207 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 ITGA2P17301 1181 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 PRPS1L1P21108 318 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 TACR3P29371 465 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 RPL3P39023 403 aaKnown RBP9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 APOBEC1P41238 236 aaKnown RBP9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 MAGEA8P43361 318 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 H3F3AP84243 136 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 CHRNB3Q05901 458 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 BNIP2Q12982 314 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 SLC17A1Q14916 467 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 PDCD2Q16342 344 aaPredicted RBP9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 OR7E24Q6IFN5 339 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 SLC46A3Q7Z3Q1 461 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 TMEM99Q8N816 258 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 ANKFN1Q8N957 763 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 ZIC4Q8N9L1 334 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 ARL8AQ96BM9 186 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 APOPT1Q96IL0 206 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 ALKBH3Q96Q83 286 aaPredicted RBP9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 FKRPQ9H9S5 495 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 TMEM181Q9P2C4 612 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 OSGIN1Q9UJX0 560 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 TMED7Q9Y3B3 224 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 HDGFL3Q9Y3E1 203 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 PMF1-BGLAPU3KQ54 211 aa9.76□□□□□ -0.85
PRKCSH-220ENST00000593104 LYNX1G3V0Z9 82 aa9.75□□□□□ -0.85
PRKCSH-220ENST00000593104 GPR171O14626 319 aa9.75□□□□□ -0.85
PRKCSH-220ENST00000593104 WIPF1O43516 503 aa9.75□□□□□ -0.85
PRKCSH-220ENST00000593104 ITM2AO43736 263 aa9.75□□□□□ -0.85
PRKCSH-220ENST00000593104 SCN2BO60939 215 aa9.75□□□□□ -0.85
PRKCSH-220ENST00000593104 RGS9O75916 674 aaPredicted RBP9.75□□□□□ -0.85
PRKCSH-220ENST00000593104 CHRM4P08173 479 aa9.75□□□□□ -0.85
PRKCSH-220ENST00000593104 LYNX1P0DP58 116 aa9.75□□□□□ -0.85
PRKCSH-220ENST00000593104 CALCRP30988 508 aa9.75□□□□□ -0.85
PRKCSH-220ENST00000593104 SELENOPP49908 381 aa9.75□□□□□ -0.85
PRKCSH-220ENST00000593104 NME5P56597 212 aa9.75□□□□□ -0.85
PRKCSH-220ENST00000593104 PRPS1P60891 318 aa9.75□□□□□ -0.85
PRKCSH-220ENST00000593104 KCNJ10P78508 379 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms